RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GOLT1BQ9Y3E0 138 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 X6R8D5 127 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 C7orf71A4D174 169 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 H7BYZ3 331 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 LTAP01374 205 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 AKR1C3P42330 323 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 TAS2R60P59551 318 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 Q6AWC8 147 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
SYNE2-219ENST00000555323 TMEM250H0YL14 139 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 RGS13O14921 159 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 MIFP14174 115 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
SYNE2-219ENST00000555323 UBE2G1P62253 170 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 BTN1A1Q13410 526 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 PRR9Q5T870 116 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 LINC00467Q9BRT7 94 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 U3KQK5 164 aa9.17□□□□□ -0.94
SYNE2-219ENST00000555323 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 J3KRW8 73 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 RPL35P42766 123 aaKnown RBP9.16□□□□□ -0.94
SYNE2-219ENST00000555323 TOR2AQ5JU69 321 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 Q86TA4 180 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 LINC01587Q99440 93 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 EIF5A2Q9GZV4 153 aaKnown RBP9.16□□□□□ -0.94
SYNE2-219ENST00000555323 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
SYNE2-219ENST00000555323 SMUG1Q53HV7 270 aa9.15□□□□□ -0.94
SYNE2-219ENST00000555323 LCE2DQ5TA82 110 aaPredicted RBP9.15□□□□□ -0.94
SYNE2-219ENST00000555323 BAGE2Q86Y30 109 aa9.15□□□□□ -0.94
SYNE2-219ENST00000555323 Q8NAQ8 132 aa9.15□□□□□ -0.94
SYNE2-219ENST00000555323 SMIM12Q96EX1 92 aa9.15□□□□□ -0.94
SYNE2-219ENST00000555323 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
SYNE2-219ENST00000555323 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 SRP19P09132 144 aaKnown RBP9.14□□□□□ -0.95
SYNE2-219ENST00000555323 CRIP1P50238 77 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 ZNF80P51504 273 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-219ENST00000555323 Q6ZQT7 251 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 NBEAL2Q6ZNJ1 2754 aa9.14□□□□□ -0.95
SYNE2-219ENST00000555323 RAB19A4D1S5 217 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 GCGP01275 180 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
SYNE2-219ENST00000555323 PEA15Q15121 130 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 RRN3P1Q2M238 152 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 ZNF674Q2M3X9 581 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 C11orf68Q9H3H3 251 aaKnown RBP9.13□□□□□ -0.95
SYNE2-219ENST00000555323 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
SYNE2-219ENST00000555323 TRBV20OR9-2A0A075B6H5 130 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 IGHV1OR15-1A0A075B7D0 117 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 IGHV4-28A0A0C4DH34 117 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 ZNF705GA8MUZ8 300 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-219ENST00000555323 C9JCJ5 164 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 IGLV2-8P01709 118 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 PRM2P04554 102 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 AZU1P20160 251 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 SRSF3P84103 164 aaKnown RBP9.12□□□□□ -0.95
SYNE2-219ENST00000555323 EIF4E3Q8N5X7 224 aaKnown RBP9.12□□□□□ -0.95
SYNE2-219ENST00000555323 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
SYNE2-219ENST00000555323 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 PARLQ9H300 379 aa9.12□□□□□ -0.95
SYNE2-219ENST00000555323 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
SYNE2-219ENST00000555323 C9JQL5 133 aa9.11□□□□□ -0.95
SYNE2-219ENST00000555323 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
SYNE2-219ENST00000555323 FAM159AQ6UWV7 190 aa9.11□□□□□ -0.95
SYNE2-219ENST00000555323 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
SYNE2-219ENST00000555323 TP53TG3Q9ULZ0 132 aa9.11□□□□□ -0.95
SYNE2-219ENST00000555323 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 A0A0J9YWU9 116 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 GNG4P50150 75 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 FAM162BQ5T6X4 162 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 LY96Q9Y6Y9 160 aa9.1□□□□□ -0.95
SYNE2-219ENST00000555323 IGKV3D-20A0A0C4DH25 116 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 HTN1P15515 57 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 FAM74A3Q4VXF1 159 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
SYNE2-219ENST00000555323 ZNF575Q86XF7 245 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 NHLRC2Q8NBF2 726 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 OCC1Q8TAD7 63 aa9.09□□□□□ -0.95
SYNE2-219ENST00000555323 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
SYNE2-219ENST00000555323 CBY3A6NI87 242 aa9.08□□□□□ -0.96
SYNE2-219ENST00000555323 DEFB4AO15263 64 aa9.08□□□□□ -0.96
SYNE2-219ENST00000555323 SH2D1AO60880 128 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms