RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 ITPR1Q14643 2758 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-213ENST00000554805 K7ERU9 68 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 HSD52Q0P140 79 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 CSMD2Q7Z408 3487 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 IL17RELQ6ZVW7 336 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 U3KQK5 164 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 OR9G4Q8NGQ1 327 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 TTTY13Q9BZ97 58 aa7.39□□□□□ -1.23
SYNE2-213ENST00000554805 IGHV7-81A0A0B4J1V7 117 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 A0A0G2JLM5 398 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 TMEM160Q9NX00 188 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 SORL1Q92673 2214 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 CFAP46Q8IYW2 2715 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
SYNE2-213ENST00000554805 TMEM78Q5T7P6 136 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 GTSCR1Q86UQ5 136 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 OR4X2Q8NGF9 303 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 TMEM158Q8WZ71 300 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
SYNE2-213ENST00000554805 UTP20O75691 2785 aaKnown RBP7.38□□□□□ -1.23
SYNE2-213ENST00000554805 FGF6P10767 208 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 FCER1GP30273 86 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 SPANXN1Q5VSR9 72 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 PIP4P2Q8N4L2 257 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 OR2K2Q8NGT1 345 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 C9orf118A6NHY6 69 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 G3V318 75 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 H3BRM9 83 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 NXT2Q9NPJ8 142 aaKnown RBP7.37□□□□□ -1.23
SYNE2-213ENST00000554805 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 CDSNQ15517 529 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 MEGF9Q9H1U4 602 aa7.37□□□□□ -1.23
SYNE2-213ENST00000554805 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
SYNE2-213ENST00000554805 ZNF48Q96MX3 618 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-213ENST00000554805 LINC00527Q9UJ94 153 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 VPS13CQ709C8 3753 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 IGSF10Q6WRI0 2623 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 IGHV3OR16-10A0A075B7F0 116 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 TRAV26-2A0A0B4J265 109 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 DTX2Q86UW9 622 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 MYOZ3Q8TDC0 251 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 DPF1Q92782 380 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 RNF185Q96GF1 192 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 METTL26Q96S19 204 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 KLK15Q9H2R5 256 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 SAP30O75446 220 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 RIPPLY3P57055 190 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 Q8N9W7 124 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 C16orf92Q96LL3 132 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 AGPAT4-IT1Q9H0P7 198 aa7.36□□□□□ -1.23
SYNE2-213ENST00000554805 IGKV3-7A0A075B6H7 116 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 IGKCP01834 107 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 IGHG4P01861 327 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 FABP2P12104 132 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 RPL11P62913 178 aaKnown RBP7.35□□□□□ -1.23
SYNE2-213ENST00000554805 ZC2HC1BQ5TFG8 222 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 MINOS1Q5TGZ0 78 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 JMJD8Q96S16 334 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 UBTD1Q9HAC8 227 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 MINOS1-NBL1R4GNA1 71 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 TRGV3P03979 118 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 PRB1P04280 392 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
SYNE2-213ENST00000554805 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 SLC50A1Q9BRV3 221 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 FASNP49327 2511 aaKnown RBP7.35□□□□□ -1.23
SYNE2-213ENST00000554805 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 SPRY2O43597 315 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 BUB3O43684 328 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
SYNE2-213ENST00000554805 RAB9AP51151 201 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 FAM110DQ8TAY7 271 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-213ENST00000554805 ZNF502Q8TBZ5 544 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 EEF1AKMT3Q96AZ1 226 aa7.35□□□□□ -1.23
SYNE2-213ENST00000554805 LINC01548A6NM66 108 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 DPM2O94777 84 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 IGKV2D-26A0A0A0MRZ7 120 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 TMEM8BA6NDV4 472 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 H3BVH4 76 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
SYNE2-213ENST00000554805 WNK1Q9H4A3 2382 aa7.34□□□□□ -1.23
SYNE2-213ENST00000554805 TRAV40A0A0B4J280 105 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 K7EMI3 77 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 K7EP34 96 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 SAA4P35542 130 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 KLRB1Q12918 225 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 ODF1Q14990 250 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms