RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 LINC01006Q8NI28 216 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 URB1-AS1Q96HZ7 61 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 WWC2-AS2Q96NR7 200 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
SRP54-205ENST00000554803 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 DPM3Q9P2X0 92 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 U3KQK5 164 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 LYSTQ99698 3801 aa8.63□□□□□ -1.03
SRP54-205ENST00000554803 K7EIM0 57 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 SIVA1O15304 175 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 NDUFB8O95169 186 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 CNIH1O95406 144 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 COX7A1P24310 79 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 RHOGP84095 191 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 DIAPH2-AS1Q14236 149 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 DEFB125Q8N687 156 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 RPH3ALQ9UNE2 315 aa8.62□□□□□ -1.03
SRP54-205ENST00000554803 A0A1W2PRD5 423 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 A0A1W2PRF3 423 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 A0A1W2PRM7 423 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 KLK9Q2XQG4 91 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 MINOS1Q5TGZ0 78 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 LCN12Q6JVE5 192 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 ZNF491Q8N8L2 437 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 OR9G4Q8NGQ1 327 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 PIFOQ8TCI5 191 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 SCRT2Q9NQ03 307 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 CLEC5AQ9NY25 188 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 KLK9Q9UKQ9 250 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 DNAH7Q8WXX0 4024 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
SRP54-205ENST00000554803 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
SRP54-205ENST00000554803 COX8AP10176 69 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 HINT1P49773 126 aaPredicted RBP8.6□□□□□ -1.03
SRP54-205ENST00000554803 DEFB112Q30KQ8 113 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 LDLRAD2Q5SZI1 272 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 LINC00322Q6ZN03 302 aaPredicted RBP8.6□□□□□ -1.03
SRP54-205ENST00000554803 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 TTC9CQ8N5M4 171 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 TMEM86BQ8N661 226 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 PRSS3P2Q8NHM4 247 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 FBXL15Q9H469 300 aa8.6□□□□□ -1.03
SRP54-205ENST00000554803 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 GNG7O60262 68 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 TFPI2P48307 235 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 EBI3Q14213 229 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 C5orf64Q2M2E5 130 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 Q6YL49 198 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 OR4C5Q8NGB2 326 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 RITA1Q96K30 269 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 CNFNQ9BYD5 112 aa8.59□□□□□ -1.03
SRP54-205ENST00000554803 PEF1Q9UBV8 284 aaKnown RBP8.59□□□□□ -1.03
SRP54-205ENST00000554803 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 A6NDN8 102 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 ODF3BA8MYP8 253 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 IGHV3-48P01763 117 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 IL4P05112 153 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
SRP54-205ENST00000554803 MRPL53Q96EL3 112 aaKnown RBP8.58□□□□□ -1.04
SRP54-205ENST00000554803 A0A087X0K7 114 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 IGHV3-72A0A0B4J1Y9 119 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 HBDP02042 147 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 GPR183P32249 361 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 CDKN1BP46527 198 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 OXLD1Q5BKU9 147 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 LHFPL4Q7Z7J7 247 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 EXOC3-AS1Q8N2X6 119 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 OR4X2Q8NGF9 303 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 CFHR4Q92496 578 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 PRELID3AQ96N28 172 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 C21orf62Q9NYP8 219 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 SMPXQ9UHP9 88 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 RABAC1Q9UI14 185 aa8.57□□□□□ -1.04
SRP54-205ENST00000554803 CENPVL3A0A0U1RRI6 287 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 CCL25O15444 150 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 NUDT3O95989 172 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 CNTFRP26992 372 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 BRD3OSQ6XYD6 125 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 DYNAPQ8N1N2 210 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 ARPC1AQ92747 370 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 SLC50A1Q9BRV3 221 aa8.56□□□□□ -1.04
SRP54-205ENST00000554803 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms