RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SLC25A6P12236 298 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 TCL1AP56279 114 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PLP1P60201 277 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 LCN15Q6UWW0 184 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 ACOT7LQ6ZUV0 252 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 CLVS1Q8IUQ0 354 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-229ENST00000554672 DIRAS2Q96HU8 199 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 VGLL1Q99990 258 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 Q9HAA7 133 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 ZNF331Q9NQX6 463 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-229ENST00000554672 SHPKQ9UHJ6 478 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 PAIP2BQ9ULR5 123 aaKnown RBP3.16□□□□□ -1.9
ATXN3-229ENST00000554672 V9GYH0 126 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 LRP2P98164 4655 aa3.16□□□□□ -1.9
ATXN3-229ENST00000554672 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
ATXN3-229ENST00000554672 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 DUXBA0A1W2PPF3 345 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 C7orf71A4D174 169 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 FABP12A6NFH5 140 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 RBFOX3A6NFN3 312 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 DISC1C4P0D8 188 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 MPDU1O75352 247 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 IGLV2-11P01706 119 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 OR5G3P0C626 314 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 SELENOTP62341 195 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 AKR1C1Q04828 323 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 LINC00299Q6ZSB3 139 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 CYP2G1PQ6ZSU1 146 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 LYZL2Q7Z4W2 148 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 OR51S1Q8NGJ8 323 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 TMEM37Q8WXS4 190 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 SLC25A21Q9BQT8 299 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
ATXN3-229ENST00000554672 SCP2D1Q9UJQ7 156 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 PXMP4Q9Y6I8 212 aa3.15□□□□□ -1.91
ATXN3-229ENST00000554672 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-229ENST00000554672 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 LINC00854A0A1B0GVQ3 168 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 GAGE10A6NGK3 116 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 PRSS47A8MTI9 375 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 KLLNB2CW77 178 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 C9JCJ5 164 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 RGS5O15539 181 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 MED6O75586 246 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
ATXN3-229ENST00000554672 NMBP08949 121 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
ATXN3-229ENST00000554672 LINC00869P0C866 280 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 IAPPP10997 89 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
ATXN3-229ENST00000554672 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 UBE2MP61081 183 aaKnown RBP3.14□□□□□ -1.91
ATXN3-229ENST00000554672 SRPXP78539 464 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 IL18Q14116 193 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 WFDC2Q14508 124 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 LAGE3Q14657 143 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 TMEM128Q5BJH2 165 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 Q6ZRU5 148 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 Q8N976 141 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 NEXN-AS1Q8NBZ9 246 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 PAXXQ9BUH6 204 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 SLC25A31Q9H0C2 315 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 ARL6Q9H0F7 186 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 ARV1Q9H2C2 271 aa3.14□□□□□ -1.91
ATXN3-229ENST00000554672 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 SMCO3A2RU48 225 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 RNF222A6NCQ9 220 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 PGPEP1LA6NFU8 196 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 WRBO00258 174 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 LECT2O14960 151 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 SYNGR2O43760 224 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 IGHV3-30P01768 117 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 GPX1P07203 203 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 SFTA3P0C7M3 94 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 IGHV3-30-5P0DP03 117 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 ANXA3P12429 323 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 FAUP35544 74 aaKnown RBP3.13□□□□□ -1.91
ATXN3-229ENST00000554672 PPT1P50897 306 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 HNRNPA3P51991 378 aaKnown RBP3.13□□□□□ -1.91
ATXN3-229ENST00000554672 AP3S2P59780 193 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 POLR2GP62487 172 aaKnown RBP eCLIP3.13□□□□□ -1.91
ATXN3-229ENST00000554672 CD300CQ08708 224 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 ZNF846Q147U1 533 aa3.13□□□□□ -1.91
ATXN3-229ENST00000554672 GUK1Q16774 197 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms