RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PRAF2O60831 178 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 TSHBP01222 138 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PRM2P04554 102 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 SNRPCP09234 159 aaKnown RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 SPART-AS1P0CW21 52 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PVALBP20472 110 aaPredicted RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 FGF7P21781 194 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 S100A11P31949 105 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 RPL29P47914 159 aaKnown RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 EMP1P54849 157 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 B2MP61769 119 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 HBG1P69891 147 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 HBG2P69892 147 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 BAXQ07812 192 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PSG3Q16557 428 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 RRN3P1Q2M238 152 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 GCSAMLQ5JQS6 135 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 FAM222AQ5U5X8 452 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 C10orf113Q5VZT2 155 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 Q75L30 129 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 S100A7AQ86SG5 101 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 STX12Q86Y82 276 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 OR1L4Q8NGR5 311 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 RPUSD4Q96CM3 377 aaKnown RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 SAT2Q96F10 170 aaPredicted RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 SLC50A1Q9BRV3 221 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 NIPSNAP3BQ9BS92 247 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 MARVELD1Q9BSK0 173 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 NPCDR1Q9BY65 106 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 NMES1Q9C002 83 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 GPN1Q9HCN4 374 aaPredicted RBP2.92□□□□□ -1.94
VTI1B-203ENST00000554636 SLC39A9Q9NUM3 307 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF586Q9NXT0 402 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 OR5AC2Q9NZP5 309 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 RNF24Q9Y225 148 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PXMP4Q9Y6I8 212 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 HSPG2P98160 4391 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PCLOQ9Y6V0 5065 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF705GA8MUZ8 300 aaPredicted RBP2.91□□□□□ -1.94
VTI1B-203ENST00000554636 E5RGE8 158 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF253O75346 499 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 MPDU1O75352 247 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 AZU1P20160 251 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 TSPOP30536 169 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 CDKN1BP46527 198 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 H2BFSP57053 126 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 RHOBP62745 196 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 RAB31Q13636 194 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 CLINT1Q14677 625 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 OXA1LQ15070 435 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 ATP6V1FQ16864 119 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 LRRC37A5PQ49AS3 106 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 FFAR4Q5NUL3 377 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 ZC2HC1BQ5TFG8 222 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 Q6ZRG5 221 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 MIR17HGQ75NE6 70 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 BPIFA4PQ86YQ2 179 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 OR5C1Q8NGR4 320 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 RNASE8Q8TDE3 154 aaKnown RBP2.91□□□□□ -1.94
VTI1B-203ENST00000554636 PPP1R1CQ8WVI7 109 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 MRPL53Q96EL3 112 aaKnown RBP2.91□□□□□ -1.94
VTI1B-203ENST00000554636 FAM210BQ96KR6 192 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 FAM167A-AS1Q96KT0 104 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 ODF3Q96PU9 254 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 PFDN5Q99471 154 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 SLC25A2Q9BXI2 301 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 PARD6GQ9BYG4 376 aaPredicted RBP2.91□□□□□ -1.94
VTI1B-203ENST00000554636 WDR61Q9GZS3 305 aaKnown RBP2.91□□□□□ -1.94
VTI1B-203ENST00000554636 DNAJC4Q9NNZ3 241 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
VTI1B-203ENST00000554636 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 LYRM9A8MSI8 78 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 M0R3E3 92 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 MPC2O95563 127 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 CT45A10P0DMU9 189 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 PYYP10082 97 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 HIST1H1EP10412 219 aaKnown RBP2.9□□□□□ -1.95
VTI1B-203ENST00000554636 TAS2R60P59551 318 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 DEFA1P59665 94 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 DEFA3P59666 94 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 UBE2V1Q13404 147 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 GUK1Q16774 197 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 ZFP69Q49AA0 526 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 TMEM256Q8N2U0 113 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00612Q8N6U2 182 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 LRRC20Q8TCA0 184 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 FAM19A4Q96LR4 140 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 ATP5SQ99766 215 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 C20orf144Q9BQM9 153 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 TMEM208Q9BTX3 173 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 NDUFAF3Q9BU61 184 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 SLC25A31Q9H0C2 315 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 BATF3Q9NR55 127 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 PRELID1Q9Y255 219 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 HSPB11Q9Y547 144 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 MUC4Q99102 2169 aa2.9□□□□□ -1.95
VTI1B-203ENST00000554636 IGKV2-40A0A087WW87 121 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms