RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-214ENST00000554604 IGLV2-11P01706 119 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
SHMT2-214ENST00000554604 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 LINC00322Q6ZN03 302 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-214ENST00000554604 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 NHLRC2Q8NBF2 726 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 RETNQ9HD89 108 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 TRAPPC1Q9Y5R8 145 aa9.25□□□□□ -0.93
SHMT2-214ENST00000554604 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 IGHV7-4-1A0A0J9YVY3 117 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 OR4C46A6NHA9 309 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 FBLL1A6NHQ2 334 aaKnown RBP9.24□□□□□ -0.93
SHMT2-214ENST00000554604 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 CT83Q5H943 113 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 ZFP30Q9Y2G7 519 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 U3KQE9 123 aa9.24□□□□□ -0.93
SHMT2-214ENST00000554604 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 LOC102724200A0A096LPH7 203 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-214ENST00000554604 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 BUB3O43684 328 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 MT-ND6P03923 174 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 BMI1P35226 326 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 CSN1S1P47710 185 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 PSG3Q16557 428 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 WDR73Q6P4I2 378 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 HIST3H2BBQ8N257 126 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 METTL26Q96S19 204 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 RHPN1-AS1Q9BWJ2 59 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
SHMT2-214ENST00000554604 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
SHMT2-214ENST00000554604 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 CHEK1O14757 476 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 MEOX2P50222 304 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 ZFAND6Q6FIF0 208 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
SHMT2-214ENST00000554604 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
SHMT2-214ENST00000554604 IGKV3-7A0A075B6H7 116 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 TRAV8-1A0A0A6YYK1 113 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 TFPI2P48307 235 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 PAFAH1B2P68402 229 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 C16orf54Q6UWD8 224 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
SHMT2-214ENST00000554604 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-214ENST00000554604 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.94
SHMT2-214ENST00000554604 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 A8MWL6 223 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 M0R3E3 92 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 P01737 135 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 S100A2P29034 98 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 APOC4P55056 127 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
SHMT2-214ENST00000554604 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
SHMT2-214ENST00000554604 C12orf57Q99622 126 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 GFRA4Q9GZZ7 299 aa9.2□□□□□ -0.94
SHMT2-214ENST00000554604 SNURFLB1AK76 121 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-214ENST00000554604 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-214ENST00000554604 TCL1AP56279 114 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 TCF24Q7RTU0 167 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 IL17DQ8TAD2 202 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
SHMT2-214ENST00000554604 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 SAPCD1Q5SSQ6 148 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 GFI1BQ5VTD9 330 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
SHMT2-214ENST00000554604 ZC2HC1AQ96GY0 325 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 NEU1Q99519 415 aa9.18□□□□□ -0.94
SHMT2-214ENST00000554604 AGRNO00468 2067 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 A0A1W2PS18 150 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 RBAKDNA6NC62 111 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms