RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 hDV102S1A0JD36 115 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 A8MWV9 139 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 SNURFLB1AK76 121 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 F2Z2F3 143 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 EFNA2O43921 213 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 NDUFS7O75251 213 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 LYZL6O75951 148 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 EPPINO95925 133 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 SCGB1C2P0DMR2 95 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 C12orf74Q32Q52 190 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 Q6ZRU5 148 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 C17orf82Q86X59 251 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-227ENST00000554491 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 LINC01555Q8NAE3 123 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 H1FXQ92522 213 aaKnown RBP3.42□□□□□ -1.86
ATXN3-227ENST00000554491 CHCHD1Q96BP2 118 aaKnown RBP3.42□□□□□ -1.86
ATXN3-227ENST00000554491 CNRIP1Q96F85 164 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-227ENST00000554491 ABHD14BQ96IU4 210 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 FAM19A4Q96LR4 140 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 GFI1Q99684 422 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 APOOQ9BUR5 198 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 PLA2G12AQ9BZM1 189 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 ANKRD12Q6UB98 2062 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 TRGV8A0A0C4DH27 118 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 IGKV1-8A0A0C4DH67 115 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 A0A1B0GTH9 108 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 FAM240AA0A1B0GVK7 77 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 IZUMO1RA6ND01 250 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 ZFP92A6NM28 416 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 NCBP2LA6PVI3 153 aaKnown RBP3.41□□□□□ -1.86
ATXN3-227ENST00000554491 PDCD6O75340 191 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 PRSS2P07478 247 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 CD7P09564 240 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 PEBP1P30086 187 aaKnown RBP3.41□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF136P52737 540 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 RPS11P62280 158 aaKnown RBP eCLIP3.41□□□□□ -1.86
ATXN3-227ENST00000554491 SERF2P84101 59 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 Q6P435 159 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 IGFL3Q6UXB1 125 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 Q6ZSV7 163 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 LINC00311Q8N616 119 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 WFDC11Q8NEX6 87 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 CCL4L1Q8NHW4 92 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 SRSF12Q8WXF0 261 aaKnown RBP3.41□□□□□ -1.86
ATXN3-227ENST00000554491 DNAJA3Q96EY1 480 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 BORCS8Q96FH0 119 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 FMC1Q96HJ9 113 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 C2orf48Q96LS8 159 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 TXNDC17Q9BRA2 123 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 HES7Q9BYE0 225 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 FGF22Q9HCT0 170 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 HILPDAQ9Y5L2 63 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 LY96Q9Y6Y9 160 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
ATXN3-227ENST00000554491 GTF3C1Q12789 2109 aa3.4□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 CPSF4LA6NMK7 179 aaKnown RBP3.4□□□□□ -1.87
ATXN3-227ENST00000554491 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 J3QLW9 94 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 CCL21O00585 134 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 PIN1P1O15428 100 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 NDUFB2O95178 105 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 LYPD3O95274 346 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 LY6G6DO95868 133 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 TGP01266 2768 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 IGKCP01834 107 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 GYPBP06028 91 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 COX6A1P12074 109 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 HLA-DRB4P13762 266 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 COL8A2P25067 703 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 GFERP55789 205 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 DSCR4P56555 118 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-227ENST00000554491 FBXW4P57775 412 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 ARFRP1Q13795 201 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 Q6ZQT7 251 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 MMD2Q8IY49 270 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 OR5AS1Q8N127 324 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 FAM19A2Q8N3H0 131 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 DRAM1Q8N682 238 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 POM121L12Q8N7R1 296 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 C3orf56Q8N813 242 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 OR2T6Q8NHC8 308 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 FAM57AQ8TBR7 257 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 IL1F10Q8WWZ1 152 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 NABP1Q96AH0 204 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 GPX7Q96SL4 187 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-227ENST00000554491 S1PR3Q99500 378 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 PRSS27Q9BQR3 290 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 WFDC6Q9BQY6 131 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 EMC6Q9BV81 110 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 RTL8AQ9BWD3 113 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 AICDAQ9GZX7 198 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 RPUSD1Q9UJJ7 312 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms