RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 AHCTF1Q8WYP5 2266 aa1.17□□□□□ -2.22
IFT43-208ENST00000554423 CHD3Q12873 2000 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 NCOR1O75376 2440 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 WDR87Q6ZQQ6 2873 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SHANK1Q9Y566 2161 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TRBV20OR9-2A0A075B6H5 130 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IGKV1D-37A0A075B6S9 117 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IGHV3-74A0A0B4J1X5 117 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IGHV1-3A0A0C4DH29 117 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TCRBV4S1A1TA0A5B7 111 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IGLC7A0M8Q6 106 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TMEM223A0PJW6 202 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 NCBP2LA6PVI3 153 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF705FA8MVS1 300 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 LINC00587B1AMM8 73 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 B4DEV8 164 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SEC14L6B5MCN3 397 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 GGTLC3B5MD39 225 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PPP5D1E7EU14 171 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TMEM250H0YL14 139 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 BUB1B-PAK6H3BSN5 160 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 CORTO00230 105 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PPP1R2P9O14990 202 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 GATCO43716 136 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 NUPR1O60356 82 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 MPDU1O75352 247 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR2J3O76001 311 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IGLV2-8P01709 118 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 S100A8P05109 93 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SLC25A5P05141 298 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF705DP0CH99 300 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF705BP0CI00 300 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 SMIM6P0DI80 62 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 C8orf88P0DMB2 117 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 GZMBP10144 247 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 HIST1H1BP16401 226 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 NTF3P20783 257 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 USF1P22415 310 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 HTR1DP28221 377 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 MAS1LP35410 378 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SRP14P37108 136 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 GPR6P46095 362 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 GNG4P50150 75 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RND2P52198 227 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF137PP52743 207 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PRRX1P54821 245 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TAS2R45P59539 299 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 BPIFB3P59826 476 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RAB4BP61018 213 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RANP62826 216 aaKnown RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 LCN2P80188 198 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 MEF2CQ06413 473 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 SSX2Q16385 188 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 POU2AF1Q16633 256 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IQCJQ1A5X6 159 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RPEL1Q2QD12 228 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 Q56UQ5 140 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PYY3Q5JQD4 70 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 ACTL10Q5JWF8 245 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 LDLRAD2Q5SZI1 272 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TPTE2P1Q5T6R2 138 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 C10orf113Q5VZT2 155 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PATE2Q6UY27 113 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF493Q6ZR52 646 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 LINC00305Q7Z4B0 112 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 VMO1Q7Z5L0 202 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 DYNAPQ8N1N2 210 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 HIST3H2BBQ8N257 126 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TMEM256Q8N2U0 113 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 EXOC3-AS1Q8N2X6 119 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 LINC00311Q8N616 119 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR1L4Q8NGR5 311 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR1P1Q8NH06 330 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR5B3Q8NH48 314 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR4A5Q8NH83 315 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SGMS2Q8NHU3 365 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 CMTM2Q8TAZ6 248 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 C22orf15Q8WYQ4 148 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RAB1CQ92928 201 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SFRP2Q96HF1 295 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PACRGQ96M98 296 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 CAMK2N2Q96S95 79 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 PFDN5Q99471 154 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 HIST1H2BLQ99880 126 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 FOXC2Q99958 501 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 GGACTQ9BVM4 153 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 RAB1BQ9H0U4 201 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 OR51M1Q9H341 326 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 NCOR1P1Q9H4R4 102 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 NDUFA4L2Q9NRX3 87 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 TMEM167BQ9NRX6 74 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 CBLN4Q9NTU7 201 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 FKBP11Q9NYL4 201 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 IL36BQ9NZH7 164 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 KAAG1Q9UBP8 84 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 ZNF257Q9Y2Q1 563 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 SIGLEC9Q9Y336 463 aa1.16□□□□□ -2.22
IFT43-208ENST00000554423 AMMECR1Q9Y4X0 333 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 TIMM8BQ9Y5J9 83 aaPredicted RBP1.16□□□□□ -2.22
IFT43-208ENST00000554423 F11RQ9Y624 299 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms