RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 RBMY1FQ15415 496 aaKnown RBP8.89□□□□□ -0.99
SHMT2-209ENST00000553949 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 ZNF705AQ6ZN79 300 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-209ENST00000553949 C1orf158Q8N1D5 194 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 OR11H2Q8NH07 326 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 C20orf144Q9BQM9 153 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 MED9Q9NWA0 146 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 LTAP01374 205 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 RPL35P42766 123 aaKnown RBP8.88□□□□□ -0.99
SHMT2-209ENST00000553949 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 TMEM208Q9BTX3 173 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 ZFP30Q9Y2G7 519 aa8.88□□□□□ -0.99
SHMT2-209ENST00000553949 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 NDUFS6O75380 124 aaKnown RBP8.87□□□□□ -0.99
SHMT2-209ENST00000553949 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-209ENST00000553949 TAS2R60P59551 318 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 TMEM256Q8N2U0 113 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 LINC01587Q99440 93 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 NIPSNAP3BQ9BS92 247 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 X6R8D5 127 aa8.87□□□□□ -0.99
SHMT2-209ENST00000553949 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 RAB19A4D1S5 217 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 H7BYZ3 331 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 GCGP01275 180 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 SRP19P09132 144 aaKnown RBP8.86□□□□□ -0.99
SHMT2-209ENST00000553949 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-209ENST00000553949 SRSF3P84103 164 aaKnown RBP8.86□□□□□ -0.99
SHMT2-209ENST00000553949 PEA15Q15121 130 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 Q6AWC8 147 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 Q6ZQT7 251 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 TMEM183AQ8IXX5 376 aa8.86□□□□□ -0.99
SHMT2-209ENST00000553949 C9JQL5 133 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 CEBPGP53567 150 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 CENPWQ5EE01 88 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 COX8CQ7Z4L0 72 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 NHLRC2Q8NBF2 726 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 ZC2HC1AQ96GY0 325 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 NEU1Q99519 415 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 SMDT1Q9H4I9 107 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 U3KQK5 164 aa8.85□□□□□ -0.99
SHMT2-209ENST00000553949 TRAV21A0A0B4J279 112 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 SMIM9A6NGZ8 99 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 ZNF705GA8MUZ8 300 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-209ENST00000553949 PRM2P04554 102 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 PFN1P07737 140 aaKnown RBP8.84□□□□□ -0.99
SHMT2-209ENST00000553949 MIFP14174 115 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 HTN1P15515 57 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 GNG4P50150 75 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 ZNF674Q2M3X9 581 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 Q8NAQ8 132 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 PYGO2Q9BRQ0 406 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 MLST8Q9BVC4 326 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 PARLQ9H300 379 aa8.84□□□□□ -0.99
SHMT2-209ENST00000553949 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 CRIP1P50238 77 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 RRN3P1Q2M238 152 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 MUC21Q5SSG8 566 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 LINC00467Q9BRT7 94 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 NAGKQ9UJ70 344 aa8.83□□□□□ -1
SHMT2-209ENST00000553949 IGHV1OR15-1A0A075B7D0 117 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 C9JCJ5 164 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 IGLV2-8P01709 118 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 AZU1P20160 251 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 FAM162BQ5T6X4 162 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 SMIM12Q96EX1 92 aa8.82□□□□□ -1
SHMT2-209ENST00000553949 A0A0J9YWU9 116 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 CBY3A6NI87 242 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 DEFB4AO15263 64 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 SH2D1AO60880 128 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 TDRG1Q3Y452 100 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
SHMT2-209ENST00000553949 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
SHMT2-209ENST00000553949 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 COL7A1Q02388 2944 aa8.81□□□□□ -1
SHMT2-209ENST00000553949 TENM3Q9P273 2699 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 LINC00862A6NCI5 91 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 ZNF727A8MUV8 499 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 MGST1P10620 155 aaKnown RBP8.8□□□□□ -1
SHMT2-209ENST00000553949 EMP1P54849 157 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 PRR27Q6MZM9 219 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 ZNF493Q6ZR52 646 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 COMMD7Q86VX2 200 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 OCC1Q8TAD7 63 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
SHMT2-209ENST00000553949 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
SHMT2-209ENST00000553949 C16orf74Q96GX8 76 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 TP53TG3Q9ULZ0 132 aa8.8□□□□□ -1
SHMT2-209ENST00000553949 PLAC8L1A1L4L8 177 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms