RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PAX8Q06710 450 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 C2orf91Q6ZV80 131 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
ACTN1-211ENST00000553882 RAB9AP51151 201 aa11.19□□□□□ -0.62
ACTN1-211ENST00000553882 HIST1H1AQ02539 215 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-211ENST00000553882 PSMG3-AS1Q96PY0 264 aa11.19□□□□□ -0.62
ACTN1-211ENST00000553882 ITLN2Q8WWU7 325 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-211ENST00000553882 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
ACTN1-211ENST00000553882 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
ACTN1-211ENST00000553882 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 TRGV3P03979 118 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 CNFNQ9BYD5 112 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
ACTN1-211ENST00000553882 TNFRSF6BO95407 300 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 LGALS9BQ3B8N2 356 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 IGHV4-39P01824 125 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
ACTN1-211ENST00000553882 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 GNLYP22749 145 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 LEPP41159 167 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 OR4C5Q8NGB2 326 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 FGF6P10767 208 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
ACTN1-211ENST00000553882 NMUP48645 174 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 DEFB1P60022 68 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 SRSF2Q01130 221 aaKnown RBP11.15□□□□□ -0.62
ACTN1-211ENST00000553882 LY6EQ16553 131 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 IGF1P05019 195 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
ACTN1-211ENST00000553882 PPBPP02775 128 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 SPRY2O43597 315 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 PCP2Q8IVA1 136 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 PIFOQ8TCI5 191 aa11.14□□□□□ -0.63
ACTN1-211ENST00000553882 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 SMAD7O15105 426 aaKnown RBP11.13□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 ARL3P36405 182 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 PRR9Q5T870 116 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 IGKV3-7A0A075B6H7 116 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV4-61A0A0C4DH41 118 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 TMEM97Q5BJF2 176 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
ACTN1-211ENST00000553882 H3BVH4 76 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV4-38-2P0DP08 117 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 U3KQE9 123 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 CENPEQ02224 2701 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 C7orf71A4D174 169 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 PRSS1P07477 247 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
ACTN1-211ENST00000553882 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
ACTN1-211ENST00000553882 CD5LO43866 347 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
ACTN1-211ENST00000553882 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 FCER1GP30273 86 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 OR1N2Q8NGR9 330 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
ACTN1-211ENST00000553882 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 DPF1Q92782 380 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 ZANQ9Y493 2812 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 MYO18BQ8IUG5 2567 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 FAM223BA6NKX1 122 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 FAM223AQ8IWN6 122 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
ACTN1-211ENST00000553882 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-211ENST00000553882 A1L4Q6 167 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
ACTN1-211ENST00000553882 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
ACTN1-211ENST00000553882 PIEZO1Q92508 2521 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 H3BUX3 64 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms