RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RPH3ALQ9UNE2 315 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 TENM3Q9P273 2699 aa6.01□□□□□ -1.45
PSEN1-209ENST00000553855 RBAKDNA6NC62 111 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF705GA8MUZ8 300 aaPredicted RBP6□□□□□ -1.45
PSEN1-209ENST00000553855 SNURFLB1AK76 121 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 STAG3L2P0CL84 134 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 STAG3L3P0CL85 134 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 ARL14EPLP0DKL9 152 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 CT45A10P0DMU9 189 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 PRB4P10163 310 aaPredicted RBP6□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF138P52744 262 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 TCTAP57738 103 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 DAD1P61803 113 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 ERCC8Q13216 396 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF493Q6ZR52 646 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 C9orf47Q6ZRZ4 202 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 C16orf74Q96GX8 76 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 NDFIP1Q9BT67 221 aa6□□□□□ -1.45
PSEN1-209ENST00000553855 YTHDF2Q9Y5A9 579 aaKnown RBP6□□□□□ -1.45
PSEN1-209ENST00000553855 IGKV2-40A0A087WW87 121 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-209ENST00000553855 TRAV12-3A0A0B4J271 114 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 CTXND1A0A1B0GTU2 59 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 C7orf71A4D174 169 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 IGLL5B9A064 214 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-209ENST00000553855 BCL2L11O43521 198 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 IGKV2D-40P01614 121 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-209ENST00000553855 NMBP08949 121 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 GCHFRP30047 84 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 RNASE4P34096 147 aaKnown RBP5.99□□□□□ -1.45
PSEN1-209ENST00000553855 FAM222AQ5U5X8 452 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 GFI1BQ5VTD9 330 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 EIF5AL1Q6IS14 154 aaKnown RBP5.99□□□□□ -1.45
PSEN1-209ENST00000553855 AKAP14Q86UN6 197 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 ARL6IP6Q8N6S5 226 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 PYGO2Q9BRQ0 406 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 AGPAT4-IT1Q9H0P7 198 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
PSEN1-209ENST00000553855 AGRNO00468 2067 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 TRBV7-9A0A0J9YWB2 115 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 LCE6AA0A183 80 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 GAGE10A6NGK3 116 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 CBY3A6NI87 242 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 UMAD1C9J7I0 102 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 EIF3GO75821 320 aaKnown RBP eCLIP5.98□□□□□ -1.45
PSEN1-209ENST00000553855 IFNA7P01567 189 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 SEC11BP0C7V7 166 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 TPT1P13693 172 aaKnown RBP5.98□□□□□ -1.45
PSEN1-209ENST00000553855 Q6ZNX1 250 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 Q6ZTC4 211 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 GOLT1AQ6ZVE7 132 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 C5orf17Q8NAS9 161 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF680Q8NEM1 530 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 TMEM263Q8WUH6 116 aaKnown RBP5.98□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 ST6GAL2Q96JF0 529 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 NKX6-2Q9C056 277 aaPredicted RBP5.98□□□□□ -1.45
PSEN1-209ENST00000553855 TIMM8BQ9Y5J9 83 aaPredicted RBP5.98□□□□□ -1.45
PSEN1-209ENST00000553855 LENEPQ9Y5L5 61 aa5.98□□□□□ -1.45
PSEN1-209ENST00000553855 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 MAP1LC3B2A6NCE7 125 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 FBLL1A6NHQ2 334 aaKnown RBP5.97□□□□□ -1.45
PSEN1-209ENST00000553855 F6UZH7 168 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 G3V3Q6 166 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 TEX46H3BTG2 121 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 LY6G6CO95867 125 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 DEFB130BP0DP73 79 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 DEFB130AP0DP74 79 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 HTN3P15516 51 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 CRISP2P16562 243 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 PPT1P50897 306 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 C12orf74Q32Q52 190 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 ZFP69Q49AA0 526 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 TMUB2Q71RG4 321 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 ZNF767PQ75MW2 155 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 TCTE3Q8IZS6 198 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 EIF4E3Q8N5X7 224 aaKnown RBP5.97□□□□□ -1.45
PSEN1-209ENST00000553855 TMED6Q8WW62 240 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 VGLL1Q99990 258 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 MAP1LC3BQ9GZQ8 125 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 CYTL1Q9NRR1 136 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 CELA1Q9UNI1 258 aa5.97□□□□□ -1.45
PSEN1-209ENST00000553855 KLLNB2CW77 178 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 BTN1A1Q13410 526 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 FAM159AQ6UWV7 190 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 DPPA3Q6W0C5 159 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 OR11H4Q8NGC9 324 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 Q8TAT8 98 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 FAM213BQ8TBF2 198 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 FAM210BQ96KR6 192 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 NDUFAF3Q9BU61 184 aa5.96□□□□□ -1.46
PSEN1-209ENST00000553855 NOP10Q9NPE3 64 aaKnown RBP5.96□□□□□ -1.46
PSEN1-209ENST00000553855 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 IGHV1OR15-1A0A075B7D0 117 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms