RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
PSEN1-208ENST00000553719 UBE2G1P62253 170 aa13.1□□□□□ -0.31
PSEN1-208ENST00000553719 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
PSEN1-208ENST00000553719 SMDT1Q9H4I9 107 aa13.1□□□□□ -0.31
PSEN1-208ENST00000553719 TRBV20OR9-2A0A075B6H5 130 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 TAS2R60P59551 318 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 C20orf144Q9BQM9 153 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 MLST8Q9BVC4 326 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 RETNQ9HD89 108 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
PSEN1-208ENST00000553719 C7orf71A4D174 169 aa13.08□□□□□ -0.32
PSEN1-208ENST00000553719 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
PSEN1-208ENST00000553719 GPX1P07203 203 aa13.08□□□□□ -0.32
PSEN1-208ENST00000553719 Q6AWC8 147 aa13.08□□□□□ -0.32
PSEN1-208ENST00000553719 RCHY1Q96PM5 261 aa13.08□□□□□ -0.32
PSEN1-208ENST00000553719 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
PSEN1-208ENST00000553719 J3KRW8 73 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 SPRY2O43597 315 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-208ENST00000553719 Q6ZQT7 251 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 PARLQ9H300 379 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 X6R8D5 127 aa13.07□□□□□ -0.32
PSEN1-208ENST00000553719 STAB2Q8WWQ8 2551 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
PSEN1-208ENST00000553719 PEA15Q15121 130 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 ZC2HC1AQ96GY0 325 aa13.06□□□□□ -0.32
PSEN1-208ENST00000553719 C9JCJ5 164 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 NHLRC4P0CG21 123 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-208ENST00000553719 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 NEU1Q99519 415 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 GOLT1BQ9Y3E0 138 aa13.05□□□□□ -0.32
PSEN1-208ENST00000553719 H7BYZ3 331 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 GCGP01275 180 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 CRIP1P50238 77 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 BAGE2Q86Y30 109 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 NHLRC2Q8NBF2 726 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 LINC00467Q9BRT7 94 aa13.04□□□□□ -0.32
PSEN1-208ENST00000553719 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
PSEN1-208ENST00000553719 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
PSEN1-208ENST00000553719 OR11H2Q8NH07 326 aa13.03□□□□□ -0.32
PSEN1-208ENST00000553719 NIPSNAP3BQ9BS92 247 aa13.03□□□□□ -0.32
PSEN1-208ENST00000553719 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 GNG4P50150 75 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 CEBPGP53567 150 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 Q8NAQ8 132 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 C11orf21Q9P2W6 132 aa13.02□□□□□ -0.33
PSEN1-208ENST00000553719 TRAV21A0A0B4J279 112 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 TDRG1Q3Y452 100 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 UQCC3Q6UW78 93 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 PYGO2Q9BRQ0 406 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 TGP01266 2768 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 DNAH7Q8WXX0 4024 aa13.01□□□□□ -0.33
PSEN1-208ENST00000553719 IGHV3OR16-12A0A075B7B8 117 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 PRM2P04554 102 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 LINC01587Q99440 93 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 SMIM7Q9BQ49 75 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
PSEN1-208ENST00000553719 IGHV1OR15-1A0A075B7D0 117 aa12.99□□□□□ -0.33
PSEN1-208ENST00000553719 K7EN84 100 aa12.99□□□□□ -0.33
PSEN1-208ENST00000553719 MIFP14174 115 aa12.99□□□□□ -0.33
PSEN1-208ENST00000553719 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
PSEN1-208ENST00000553719 FAM162BQ5T6X4 162 aa12.99□□□□□ -0.33
PSEN1-208ENST00000553719 IGHV4-28A0A0C4DH34 117 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 ZNF727A8MUV8 499 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 ZNF705GA8MUZ8 300 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-208ENST00000553719 SH2D1AO60880 128 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 AZU1P20160 251 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 ANXA2RQ3ZCQ2 193 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
PSEN1-208ENST00000553719 RNASE8Q8TDE3 154 aaKnown RBP12.98□□□□□ -0.33
PSEN1-208ENST00000553719 C19orf71A6NCJ1 209 aa12.97□□□□□ -0.33
PSEN1-208ENST00000553719 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
PSEN1-208ENST00000553719 MUC21Q5SSG8 566 aa12.97□□□□□ -0.33
PSEN1-208ENST00000553719 ZNF575Q86XF7 245 aa12.97□□□□□ -0.33
PSEN1-208ENST00000553719 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
PSEN1-208ENST00000553719 IGKV3D-20A0A0C4DH25 116 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 LINC01559Q495D7 138 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 LINC01551Q86U37 167 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 407.3 ms