RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
PSEN1-206ENST00000553447 TGIF2-C20orf24A0A0A6YYL0 155 aa13.06□□□□□ -0.32
PSEN1-206ENST00000553447 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
PSEN1-206ENST00000553447 INSL3P51460 131 aa13.06□□□□□ -0.32
PSEN1-206ENST00000553447 AGRNO00468 2067 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 SMIM27A0A1W2PRY6 76 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 CXCL1P09341 107 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 HLA-DRB4P13762 266 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-206ENST00000553447 FAM3BP58499 235 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-206ENST00000553447 ZNF124Q15973 351 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 PRR9Q5T870 116 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 APRG1Q8IVJ8 170 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 HLA-DRB4X5D2U9 266 aa13.05□□□□□ -0.32
PSEN1-206ENST00000553447 TRBV24-1A0A075B6N3 115 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 A8MTW9 85 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 A8MWL6 223 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 LEPP41159 167 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 MCRIP2Q9BUT9 160 aaKnown RBP13.04□□□□□ -0.32
PSEN1-206ENST00000553447 SORL1Q92673 2214 aa13.04□□□□□ -0.32
PSEN1-206ENST00000553447 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 KLLNB2CW77 178 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 OR11H12B2RN74 326 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 H3BMM0 161 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 J3KRW8 73 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 GPX1P07203 203 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 TCL1AP56279 114 aa13.03□□□□□ -0.32
PSEN1-206ENST00000553447 RPL19P84098 196 aaKnown RBP13.03□□□□□ -0.32
PSEN1-206ENST00000553447 TMEM189A5PLL7 270 aa13.02□□□□□ -0.33
PSEN1-206ENST00000553447 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
PSEN1-206ENST00000553447 FAM210BQ96KR6 192 aa13.02□□□□□ -0.33
PSEN1-206ENST00000553447 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
PSEN1-206ENST00000553447 ATRQ13535 2644 aa13.02□□□□□ -0.33
PSEN1-206ENST00000553447 TRAV21A0A0B4J279 112 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 RAB5AP20339 215 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 TSPOP30536 169 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
PSEN1-206ENST00000553447 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 NEU1Q99519 415 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 GFRA4Q9GZZ7 299 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
PSEN1-206ENST00000553447 TENM1Q9UKZ4 2725 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 FAM231BA6NCW3 169 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
PSEN1-206ENST00000553447 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
PSEN1-206ENST00000553447 ORM1P02763 201 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 CD7P09564 240 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
PSEN1-206ENST00000553447 GZMBP10144 247 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 RPS20P60866 119 aaKnown RBP13□□□□□ -0.33
PSEN1-206ENST00000553447 Q6AWC8 147 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 Q6ZQT7 251 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 GTSF1Q8WW33 167 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 CLUHP3Q96NS8 147 aa13□□□□□ -0.33
PSEN1-206ENST00000553447 TMSB15BA0A087X1C1 80 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 CDKN1BP46527 198 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
PSEN1-206ENST00000553447 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 C7orf71A4D174 169 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 M0R2Z0 102 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 TYMSP04818 313 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 IGLL1P15814 213 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 GFI1BQ5VTD9 330 aa12.98□□□□□ -0.33
PSEN1-206ENST00000553447 RPS10P46783 165 aaKnown RBP12.97□□□□□ -0.33
PSEN1-206ENST00000553447 FOXA3P55318 350 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-206ENST00000553447 STHQ8IWL8 128 aa12.97□□□□□ -0.33
PSEN1-206ENST00000553447 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 WIPF1O43516 503 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 SPINK4O60575 86 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 FXYD7P58549 80 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
PSEN1-206ENST00000553447 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 PGLYRP4Q96LB8 373 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 SRD5A3Q9H8P0 318 aa12.96□□□□□ -0.33
PSEN1-206ENST00000553447 FBN1P35555 2871 aaKnown RBP12.96□□□□□ -0.34
PSEN1-206ENST00000553447 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
PSEN1-206ENST00000553447 WFDC10AQ9H1F0 79 aa12.95□□□□□ -0.34
PSEN1-206ENST00000553447 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
PSEN1-206ENST00000553447 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
PSEN1-206ENST00000553447 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-206ENST00000553447 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-206ENST00000553447 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
PSEN1-206ENST00000553447 MRPL54Q6P161 138 aaKnown RBP12.94□□□□□ -0.34
PSEN1-206ENST00000553447 GTSCR1Q86UQ5 136 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms