RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 KLHDC1Q8N7A1 406 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 OR10J6PQ8NGY7 276 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 YAE1D1Q9NRH1 226 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 M0QZ24 198 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 SOCS3O14543 225 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 ESDP10768 282 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
RAB3IP-218ENST00000553099 CUBNO60494 3623 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 DNAJC9-AS1A6NH13 148 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 K7EMT4 169 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 HSBP1O75506 76 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 HOXD3P31249 432 aaPredicted RBP6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 C18orf65Q6ZTR6 163 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 TEX29Q8N6K0 151 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 UBE2E2Q96LR5 201 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 NOTCH2Q04721 2471 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 ZNF324O75467 553 aaPredicted RBP6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 S100A12P80511 92 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 TWIST1Q15672 202 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 Q6ZQT7 251 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 Q6ZWC4 215 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 NAGKQ9UJ70 344 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 AGRNO00468 2067 aa6.88□□□□□ -1.31
RAB3IP-218ENST00000553099 GPX1P07203 203 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 CSN3P07498 182 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 DUX3Q96PT4 197 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 A0A1B0GW15 77 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 OVOL1O14753 267 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 KRTDAPP60985 99 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 PRR9Q5T870 116 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 MYOZ3Q8TDC0 251 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 FOXC2Q99958 501 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 PRO1933Q9H354 126 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
RAB3IP-218ENST00000553099 IGKV3D-20A0A0C4DH25 116 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 SLURP1P55000 103 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 KLF5Q13887 457 aaPredicted RBP6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 CTRLP40313 264 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 ID1P41134 155 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 Q6ZSV7 163 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 NIT1Q86X76 327 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 Q8N2B8 174 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 C11orf44Q8N8P7 122 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 OR8A1Q8NGG7 326 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 MS4A6AQ9H2W1 248 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 TIMM8BQ9Y5J9 83 aaPredicted RBP6.86□□□□□ -1.31
RAB3IP-218ENST00000553099 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 M0R2Z0 102 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 CD5LO43866 347 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 PSMG4Q5JS54 123 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 ESM1Q9NQ30 184 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 ZNF575Q86XF7 245 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 TMEM86BQ8N661 226 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 KLHL30-AS1Q8NEE0 82 aa6.85□□□□□ -1.31
RAB3IP-218ENST00000553099 C2orf70A6NJV1 201 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 D6R8Y8 96 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 REC114Q7Z4M0 266 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 DPF1Q92782 380 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 LENEPQ9Y5L5 61 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 HIVEP2P31629 2446 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 H3BVH4 76 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 RNASE4P34096 147 aaKnown RBP6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 TCTEX1D4Q5JR98 221 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 DNLZQ5SXM8 178 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 URB1-AS1Q96HZ7 61 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
RAB3IP-218ENST00000553099 A0A1W2PRX2 142 aa6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 LGALS9O00182 355 aa6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 SNRPD3P62318 126 aaKnown RBP6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 SMR3AQ99954 134 aa6.83□□□□□ -1.32
RAB3IP-218ENST00000553099 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms