RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 TCF24Q7RTU0 167 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 NHLRC2Q8NBF2 726 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 C20orf173Q96LM9 149 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 SGK494Q96LW2 274 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-216ENST00000552800 CLUHP3Q96NS8 147 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 NEU1Q99519 415 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 PEMTQ9UBM1 199 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 TSSC4Q9Y5U2 329 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-216ENST00000552800 IGKV2-40A0A087WW87 121 aaPredicted RBP7.37□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV3-66A0A0C4DH42 116 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 XKRY2A2RUG3 117 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 IGKV2D-40P01614 121 aaPredicted RBP7.37□□□□□ -1.23
TMEM116-216ENST00000552800 CSN3P07498 182 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 TMEM78Q5T7P6 136 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 OR9G4Q8NGQ1 327 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 MS4A6AQ9H2W1 248 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 TRAPPC1Q9Y5R8 145 aa7.37□□□□□ -1.23
TMEM116-216ENST00000552800 NF1P21359 2839 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV4-4A0A075B6R2 117 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV3OR16-13A0A075B7E8 117 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV3-74A0A0B4J1X5 117 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 CRLF1O75462 422 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 S100A6P06703 90 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 ZNF80P51504 273 aaPredicted RBP7.36□□□□□ -1.23
TMEM116-216ENST00000552800 SYNJ2BPP57105 145 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
TMEM116-216ENST00000552800 FABP9Q0Z7S8 132 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 ZFAND2AQ8N6M9 145 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 OR8A1Q8NGG7 326 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 C8orf49Q96NF6 230 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 DUX5Q96PT3 197 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 RPH3ALQ9UNE2 315 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 NOTCH2Q04721 2471 aa7.36□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 KLLNB2CW77 178 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 F2Z2F3 143 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 SH2D1AO60880 128 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 S100A8P05109 93 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 CTRLP40313 264 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 PAFAH1B2P68402 229 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 OR2D3Q8NGH3 330 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 OR10J6PQ8NGY7 276 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 DPF1Q92782 380 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 SMR3AQ99954 134 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 GPR61Q9BZJ8 451 aa7.35□□□□□ -1.23
TMEM116-216ENST00000552800 MTORP42345 2549 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 A0A1B0GUT8 65 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 M0QZ24 198 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 CCL24O00175 119 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 TCF21O43680 179 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 CA1P00915 261 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-216ENST00000552800 FRMD6-AS1P0C7T7 363 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 HBBP68871 147 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 ERCC8Q13216 396 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 DEFB114Q30KQ6 69 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 GDF5OSQ5U4N7 250 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 PRR27Q6MZM9 219 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 C18orf65Q6ZTR6 163 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 Q71RC1 249 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-216ENST00000552800 ZFP82Q8N141 532 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 OR2K2Q8NGT1 345 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 DLX4Q92988 240 aaPredicted RBP7.34□□□□□ -1.23
TMEM116-216ENST00000552800 RAX2Q96IS3 184 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 C19orf73Q9NVV2 129 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 TP53TG3Q9ULZ0 132 aa7.34□□□□□ -1.23
TMEM116-216ENST00000552800 HIVEP1P15822 2718 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 A0A0J9YX75 114 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 SNURFLB1AK76 121 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 SNAI2O43623 268 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 OR5AL1P0C617 328 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 CD28P10747 220 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 CMC4P56277 68 aaPredicted RBP7.33□□□□□ -1.24
TMEM116-216ENST00000552800 SNRPD3P62318 126 aaKnown RBP7.33□□□□□ -1.24
TMEM116-216ENST00000552800 RIGQ13278 110 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 TDRG1Q3Y452 100 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 HIST3H2BBQ8N257 126 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 KLHL30-AS1Q8NEE0 82 aa7.33□□□□□ -1.24
TMEM116-216ENST00000552800 TRAV21A0A0B4J279 112 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 IFITM10A6NMD0 228 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
TMEM116-216ENST00000552800 EDN2P20800 178 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 SLURP1P55000 103 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 NDUFA11Q86Y39 141 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 DEFB125Q8N687 156 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 SPAG8Q99932 426 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms