RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 TRAV21A0A0B4J279 112 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 IGHV3-35A0A0C4DH35 117 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 TMEM89A2RUT3 159 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 C19orf84I3L1E1 186 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 TSPOP30536 169 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 BATFQ16520 125 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 TDRG1Q3Y452 100 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 DPF1Q92782 380 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 VGLL1Q99990 258 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 NPFFR1Q9GZQ6 430 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 ZMAT4Q9H898 229 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 SMAD5-AS1Q9Y6J3 95 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 U3KQK5 164 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 DCHS1Q96JQ0 3298 aa3.35□□□□□ -1.87
CCDC59-204ENST00000550589 IGHV4-61A0A0C4DH41 118 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 LINC01549A6NIU2 74 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 K7EMI3 77 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 IGLC6P0CF74 106 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 PF4V1P10720 104 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 S100A4P26447 101 aaKnown RBP3.34□□□□□ -1.87
CCDC59-204ENST00000550589 GAGE1Q13065 139 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 Q6ZSN1 163 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 TMEM219Q86XT9 240 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 AMN1Q8IY45 258 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 TEX29Q8N6K0 151 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 Q8N976 141 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 ZNF738Q8NE65 137 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 OR1N2Q8NGR9 330 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 ZNF747Q9BV97 191 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 DAZ1Q9NQZ3 744 aaKnown RBP3.34□□□□□ -1.87
CCDC59-204ENST00000550589 SMPXQ9UHP9 88 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 UFC1Q9Y3C8 167 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 PLXNB1O43157 2135 aa3.34□□□□□ -1.87
CCDC59-204ENST00000550589 LOC389332A0A1B0GUA5 103 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 CLPSL1A2RUU4 121 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 A6NDX4 124 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 H3BUX3 64 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 K7EMT4 169 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 COX6B1P14854 86 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 IGLL1P15814 213 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 PPIFP30405 207 aaKnown RBP3.34□□□□□ -1.88
CCDC59-204ENST00000550589 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.88
CCDC59-204ENST00000550589 FOXE3Q13461 319 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 LGALS9BQ3B8N2 356 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.88
CCDC59-204ENST00000550589 LINC01545Q5VT33 79 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 LGALS9CQ6DKI2 356 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 BRD3OSQ6XYD6 125 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 OR4X2Q8NGF9 303 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 Q8TAT8 98 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 MYOZ3Q8TDC0 251 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 TIMM8BQ9Y5J9 83 aaPredicted RBP3.34□□□□□ -1.88
CCDC59-204ENST00000550589 ABCA1O95477 2261 aa3.34□□□□□ -1.88
CCDC59-204ENST00000550589 IGF2RP11717 2491 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3OR16-8A0A075B7F1 116 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3-66A0A0C4DH42 116 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 TMEM213A2RRL7 107 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 H0Y8G0 127 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 ATP5LO75964 103 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 SNRPD3P62318 126 aaKnown RBP3.33□□□□□ -1.88
CCDC59-204ENST00000550589 SRSF1Q07955 248 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC59-204ENST00000550589 LY6EQ16553 131 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 C19orf54Q5BKX5 351 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 IL17RELQ6ZVW7 336 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 PIFOQ8TCI5 191 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 GLMPQ8WWB7 406 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 MRAP2Q96G30 205 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 URB1-AS1Q96HZ7 61 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 SIGLEC8Q9NYZ4 499 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 PEF1Q9UBV8 284 aaKnown RBP3.33□□□□□ -1.88
CCDC59-204ENST00000550589 GOLT1BQ9Y3E0 138 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 NBASA2RRP1 2371 aa3.33□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV4-4A0A075B6R2 117 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3OR16-10A0A075B7F0 116 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 M0QZ24 198 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 SIVA1O15304 175 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHG4P01861 327 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 SMIM17P0DL12 118 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ASIPP42127 132 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ERCC8Q13216 396 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 GPHB5Q86YW7 130 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 RNF182Q8N6D2 247 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 OR8A1Q8NGG7 326 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IFI27L1Q96BM0 104 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 RHPN1-AS1Q9BWJ2 59 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 PHLDA3Q9Y5J5 127 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 COL6A6A6NMZ7 2263 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 RELNP78509 3460 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3OR16-13A0A075B7E8 117 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3-74A0A0B4J1X5 117 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV7-4-1A0A0J9YVY3 117 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 LINC01548A6NM66 108 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 PRSS47A8MTI9 375 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms