RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 IQCF2Q8IXL9 164 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 PHYHIPLQ96FC7 376 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 TIMM9Q9Y5J7 89 aa7.76□□□□□ -1.17
SMARCD1-208ENST00000550280 FAM25EA8MYX2 175 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 IFNA5P01569 189 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 GYPEP15421 78 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 INPP1P49441 399 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 SLAQ13239 276 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 TMEM78Q5T7P6 136 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 C12orf45Q8N5I9 185 aaPredicted RBP7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 OR10G4Q8NGN3 311 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 NPCDR1Q9BY65 106 aa7.75□□□□□ -1.17
SMARCD1-208ENST00000550280 TRGV4A0A0C4DH28 118 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 CCDC160A6NGH7 325 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 OR10J4P0C629 311 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 NBEAP1P0C6P0 100 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 SRIP30626 198 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 S100A11P31949 105 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 ZNF138P52744 262 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 ZNF266Q14584 549 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 ZNF846Q147U1 533 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 RASL10AQ92737 203 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 C2orf50Q96LR7 162 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 ARPC5LQ9BPX5 153 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
SMARCD1-208ENST00000550280 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 TRAV6A0A075B6T7 132 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 TRBV7-9A0A0J9YWB2 115 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 C5orf51A6NDU8 294 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 TCRBP04435 133 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 CRYGDP07320 174 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 S100A10P60903 97 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 NHLH2Q02577 135 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 Q6AWC8 147 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 Q6ZSN1 163 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 THAP6Q8TBB0 222 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 OR51M1Q9H341 326 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 AAMDCQ9H7C9 122 aa7.73□□□□□ -1.17
SMARCD1-208ENST00000550280 IGLV5-52A0A0A0MRZ9 124 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 K7EP13 123 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 LYRM1O43325 122 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 EVI2AP22794 236 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 WFDC2Q14508 124 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 TMEM183AQ8IXX5 376 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 GPN1Q9HCN4 374 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 NUDT15Q9NV35 164 aa7.72□□□□□ -1.17
SMARCD1-208ENST00000550280 CENPXA8MT69 81 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 GNRH2O43555 120 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 EIF3GO75821 320 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 ATP6V1FQ16864 119 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 CNPY1Q3B7I2 92 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 PAXXQ9BUH6 204 aa7.71□□□□□ -1.18
SMARCD1-208ENST00000550280 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-16A0A0C4DH30 117 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 H0YIZ8 118 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 ORM1P02763 201 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 GATA1P15976 413 aaPredicted RBP7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 HBG1P69891 147 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 HBG2P69892 147 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 LINC01556Q5JQF7 62 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 STX12Q86Y82 276 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 Q8N814 137 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 OR5C1Q8NGR4 320 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 TVP23CQ96ET8 276 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 SPXQ9BT56 116 aa7.7□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-38A0A0C4DH36 116 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 DIRC3C9JPN6 131 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 TIRAPP58753 221 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 DPPA3Q6W0C5 159 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 Q6ZSA8 131 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 Q8N3U1 123 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 C10orf126Q8N4M7 172 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 NTN5Q8WTR8 489 aaPredicted RBP7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 PCNPQ8WW12 178 aaKnown RBP7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 TXNDC17Q9BRA2 123 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 WDR61Q9GZS3 305 aaKnown RBP7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 SLC25A31Q9H0C2 315 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
SMARCD1-208ENST00000550280 TRGV11A0A075B6L2 103 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 C9JCJ5 164 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 SIX6O95475 246 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 TYMSP04818 313 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 OR4C5Q8NGB2 326 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 Q9HAA7 133 aa7.68□□□□□ -1.18
SMARCD1-208ENST00000550280 M0R2P5 195 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 OR7C2O60412 319 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 H2AFB2P0C5Z0 115 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 FAM159AQ6UWV7 190 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms