RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 CDPF1Q6NVV7 123 aa14.47□□□□□ -0.09
BRF1-215ENST00000549655 C18orf65Q6ZTR6 163 aa14.47□□□□□ -0.09
BRF1-215ENST00000549655 DEFB1P60022 68 aa14.46□□□□□ -0.09
BRF1-215ENST00000549655 IQCJQ1A5X6 159 aa14.46□□□□□ -0.09
BRF1-215ENST00000549655 LINC00477Q96M19 166 aa14.46□□□□□ -0.09
BRF1-215ENST00000549655 FASNP49327 2511 aaKnown RBP14.46□□□□□ -0.09
BRF1-215ENST00000549655 PAFAH1B2P68402 229 aa14.45□□□□□ -0.1
BRF1-215ENST00000549655 HIST1H1AQ02539 215 aaPredicted RBP14.45□□□□□ -0.1
BRF1-215ENST00000549655 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
BRF1-215ENST00000549655 LINC01559Q495D7 138 aa14.45□□□□□ -0.1
BRF1-215ENST00000549655 FER1L6-AS1Q8NA97 138 aa14.45□□□□□ -0.1
BRF1-215ENST00000549655 LENEPQ9Y5L5 61 aa14.45□□□□□ -0.1
BRF1-215ENST00000549655 JOSD1Q15040 202 aaPredicted RBP14.45□□□□□ -0.1
BRF1-215ENST00000549655 DCANP1Q8TF63 244 aa14.45□□□□□ -0.1
BRF1-215ENST00000549655 LOC102724200A0A096LPH7 203 aaPredicted RBP14.44□□□□□ -0.1
BRF1-215ENST00000549655 SSTP61278 116 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 DEFB136Q30KP8 78 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 TCTEX1D4Q5JR98 221 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 WFDC3Q8IUB2 231 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 GATD1Q8NB37 220 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 SAMD10Q9BYL1 202 aa14.44□□□□□ -0.1
BRF1-215ENST00000549655 F6UB75 175 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 IGLC6P0CF74 106 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 CTRLP40313 264 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 ID1P41134 155 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 SAMD13Q5VXD3 122 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 OR8A1Q8NGG7 326 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 KCNS1Q96KK3 526 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 HECTD1Q9ULT8 2610 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 MUC21A0A0G2JKD1 596 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 MUC21A0A140T8X8 626 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 MUC21Q5SSG8 566 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 MS4A6AQ9H2W1 248 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 C11orf21Q9P2W6 132 aa14.43□□□□□ -0.1
BRF1-215ENST00000549655 IGKV3D-20A0A0C4DH25 116 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 KHDC1LQ5JSQ8 128 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 C4orf3Q8WVX3 66 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 AKAP9Q99996 3911 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 SLURP1P55000 103 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 PRR9Q5T870 116 aa14.42□□□□□ -0.1
BRF1-215ENST00000549655 GPX1P07203 203 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 TFPI2P48307 235 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 DNLZQ5SXM8 178 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 Q6ZQT7 251 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 ZNF493Q6ZR52 646 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 ZFAND2AQ8N6M9 145 aa14.41□□□□□ -0.1
BRF1-215ENST00000549655 LINC01619G3V211 115 aa14.4□□□□□ -0.1
BRF1-215ENST00000549655 J3KRW8 73 aa14.4□□□□□ -0.1
BRF1-215ENST00000549655 OR11H1Q8NG94 326 aa14.4□□□□□ -0.1
BRF1-215ENST00000549655 FAM19A4Q96LR4 140 aa14.4□□□□□ -0.1
BRF1-215ENST00000549655 GSN-AS1Q9NRJ2 163 aa14.4□□□□□ -0.1
BRF1-215ENST00000549655 ZNF324O75467 553 aaPredicted RBP14.39□□□□□ -0.11
BRF1-215ENST00000549655 NTF3P20783 257 aa14.39□□□□□ -0.11
BRF1-215ENST00000549655 AMTP48728 403 aa14.39□□□□□ -0.11
BRF1-215ENST00000549655 TWIST1Q15672 202 aa14.39□□□□□ -0.11
BRF1-215ENST00000549655 Q6ZWC4 215 aa14.39□□□□□ -0.11
BRF1-215ENST00000549655 DPF1Q92782 380 aa14.39□□□□□ -0.11
BRF1-215ENST00000549655 PMCHP20382 165 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 KLHL30-AS1Q8NEE0 82 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 OR1N2Q8NGR9 330 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 DUX3Q96PT4 197 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 K7EQG2 157 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 M0QZ24 198 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 HIST2H2BDQ6DRA6 164 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 ADAMTSL5Q6ZMM2 481 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 SMR3AQ99954 134 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 CNFNQ9BYD5 112 aa14.38□□□□□ -0.11
BRF1-215ENST00000549655 ZNF688P0C7X2 276 aa14.37□□□□□ -0.11
BRF1-215ENST00000549655 S100A12P80511 92 aa14.37□□□□□ -0.11
BRF1-215ENST00000549655 RNASEKQ6P5S7 137 aaKnown RBP14.37□□□□□ -0.11
BRF1-215ENST00000549655 NIT1Q86X76 327 aa14.37□□□□□ -0.11
BRF1-215ENST00000549655 FAM19A2Q8N3H0 131 aa14.37□□□□□ -0.11
BRF1-215ENST00000549655 TRBV7-9A0A0J9YWB2 115 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 RNASE1P07998 156 aaKnown RBP14.36□□□□□ -0.11
BRF1-215ENST00000549655 CD33P20138 364 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 SNRPD3P62318 126 aaKnown RBP14.36□□□□□ -0.11
BRF1-215ENST00000549655 PSMG4Q5JS54 123 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 MTORP42345 2549 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 TRAV21A0A0B4J279 112 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 FAM104BQ5XKR9 115 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 AMN1Q8IY45 258 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 TMEM160Q9NX00 188 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 MSRB1Q9NZV6 116 aa14.36□□□□□ -0.11
BRF1-215ENST00000549655 HSBP1O75506 76 aa14.35□□□□□ -0.11
BRF1-215ENST00000549655 SCGB1D1O95968 90 aa14.35□□□□□ -0.11
BRF1-215ENST00000549655 RNASE4P34096 147 aaKnown RBP14.35□□□□□ -0.11
BRF1-215ENST00000549655 URB1-AS1Q96HZ7 61 aa14.35□□□□□ -0.11
BRF1-215ENST00000549655 APRG1Q8IVJ8 170 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 OR9G4Q8NGQ1 327 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 NAGKQ9UJ70 344 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 KIR3DS1Q14943 382 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 ZNF418Q8TF45 676 aaPredicted RBP14.34□□□□□ -0.11
BRF1-215ENST00000549655 PEMTQ9UBM1 199 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 NF1P21359 2839 aa14.34□□□□□ -0.11
BRF1-215ENST00000549655 C11orf44Q8N8P7 122 aa14.33□□□□□ -0.12
BRF1-215ENST00000549655 DLX4Q92988 240 aaPredicted RBP14.33□□□□□ -0.12
BRF1-215ENST00000549655 WFDC12Q8WWY7 111 aa14.33□□□□□ -0.12
BRF1-215ENST00000549655 TMEM191AQ9H0A3 160 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms