RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ZFAND2AQ8N6M9 145 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 Q9H3A6 140 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 Q9H8V8 135 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 ZNF492Q9P255 531 aa8.42□□□□□ -1.06
DDX54-206ENST00000549271 NMBP08949 121 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 TAS2R45P59539 299 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 UBE2L3P68036 154 aaKnown RBP8.41□□□□□ -1.06
DDX54-206ENST00000549271 TTC32Q5I0X7 151 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 TMEM78Q5T7P6 136 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 CCDC28AQ8IWP9 274 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
DDX54-206ENST00000549271 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.06
DDX54-206ENST00000549271 GPX1P07203 203 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 ZNF138P52744 262 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 OR10G4Q8NGN3 311 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 OR10G9Q8NGN4 311 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 OR10G7Q8NGN6 311 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
DDX54-206ENST00000549271 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.06
DDX54-206ENST00000549271 TRAV26-1A0A087WT03 109 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 TRBV7-9A0A0J9YWB2 115 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 RNF222A6NCQ9 220 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 G3V3Q6 166 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 HMGB3O15347 200 aaKnown RBP8.39□□□□□ -1.07
DDX54-206ENST00000549271 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
DDX54-206ENST00000549271 CSN1S1P47710 185 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 DAZ2Q13117 558 aaKnown RBP8.39□□□□□ -1.07
DDX54-206ENST00000549271 ZNF266Q14584 549 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 RGS21Q2M5E4 152 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 PQLC2Q6ZP29 291 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 Q8TAT8 98 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 OTORQ9NRC9 128 aa8.39□□□□□ -1.07
DDX54-206ENST00000549271 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 PGPA6NDG6 321 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
DDX54-206ENST00000549271 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 GAGE7O76087 117 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 HOXA5P20719 270 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 OR5I1Q13606 314 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 Q6ZSN1 163 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 EIF4E3Q8N5X7 224 aaKnown RBP8.38□□□□□ -1.07
DDX54-206ENST00000549271 HYLS1Q96M11 299 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 PSMG3Q9BT73 122 aaPredicted RBP8.38□□□□□ -1.07
DDX54-206ENST00000549271 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 TNFSF18Q9UNG2 199 aa8.38□□□□□ -1.07
DDX54-206ENST00000549271 MRPS16Q9Y3D3 137 aaKnown RBP8.38□□□□□ -1.07
DDX54-206ENST00000549271 SNURFLB1AK76 121 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 STAG3L2P0CL84 134 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 STAG3L3P0CL85 134 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 ARL14EPLP0DKL9 152 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 SERF2P84101 59 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 ESRGQ1W209 222 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 RPL7L1Q6DKI1 246 aaKnown RBP8.37□□□□□ -1.07
DDX54-206ENST00000549271 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
DDX54-206ENST00000549271 Q6ZTI0 123 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 INO80EQ8NBZ0 244 aaPredicted RBP8.37□□□□□ -1.07
DDX54-206ENST00000549271 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 SUN5Q8TC36 379 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 RAB24Q969Q5 203 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 SH3BGRL3Q9H299 93 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
DDX54-206ENST00000549271 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 FXYD6-FXYD2A0A087WZ82 144 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 CDC34P49427 236 aaPredicted RBP8.36□□□□□ -1.07
DDX54-206ENST00000549271 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 ZNF680Q8NEM1 530 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
DDX54-206ENST00000549271 A0A0J9YY99 117 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 RGS13O14921 159 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 SPINK4O60575 86 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 TCL1AP56279 114 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 Q6AWC8 147 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 GOLT1AQ6ZVE7 132 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 TVP23CQ96ET8 276 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 TMPRSS5Q9H3S3 457 aa8.35□□□□□ -1.07
DDX54-206ENST00000549271 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
DDX54-206ENST00000549271 MBP02144 154 aa8.34□□□□□ -1.07
DDX54-206ENST00000549271 GCHFRP30047 84 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms