RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 BUB3O43684 328 aa10.9□□□□□ -0.66
RAPGEF3-218ENST00000548919 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.66
RAPGEF3-218ENST00000548919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.9□□□□□ -0.66
RAPGEF3-218ENST00000548919 Q8N9W7 124 aa10.9□□□□□ -0.66
RAPGEF3-218ENST00000548919 A0A1W2PPM0 123 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 SPCS1Q9Y6A9 102 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 LINC01548A6NM66 108 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 CCL21O00585 134 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
RAPGEF3-218ENST00000548919 G3V318 75 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 IGKCP01834 107 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 CLEC19AQ6UXS0 136 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 IGF2RP11717 2491 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 TMEM8BA6NDV4 472 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 UFC1Q9Y3C8 167 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 MAP1AP78559 2803 aaPredicted RBP10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 LINC01546A6NGU7 62 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 ATP6V0E1O15342 81 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 CHAC1Q9BUX1 264 aa10.88□□□□□ -0.67
RAPGEF3-218ENST00000548919 FOXC1Q12948 553 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 COL6A6A6NMZ7 2263 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 SMIM17P0DL12 118 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 SAMD5Q5TGI4 173 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
RAPGEF3-218ENST00000548919 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 SPRY2O43597 315 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 SMIM13P0DJ93 91 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 EBI3Q14213 229 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 Q8N8P6 123 aa10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
RAPGEF3-218ENST00000548919 J3KRW8 73 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 FABP2P12104 132 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 EFNA4P52798 201 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 G3V4G9 280 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 DPM2O94777 84 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 GOSR1O95249 250 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 NRACQ8N912 160 aa10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 FAM110DQ8TAY7 271 aaPredicted RBP10.85□□□□□ -0.67
RAPGEF3-218ENST00000548919 AGRNO00468 2067 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 K7ENP7 123 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 PIFOQ8TCI5 191 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 FBXL19-AS1Q494R0 122 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
RAPGEF3-218ENST00000548919 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 IGF1P05019 195 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 MINOS1Q5TGZ0 78 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 ADORA2A-AS1P86434 159 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
RAPGEF3-218ENST00000548919 OOSP1A8MZH6 123 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 H3BVH4 76 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 LAGE3Q14657 143 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 PRR9Q5T870 116 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 ATP5LO75964 103 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 C1orf122Q6ZSJ8 110 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 KLK15Q9H2R5 256 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 A0A1W2PPR1 153 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 SAA4P35542 130 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 PHLDA1Q8WV24 401 aaPredicted RBP10.82□□□□□ -0.68
RAPGEF3-218ENST00000548919 DEFB1P60022 68 aa10.81□□□□□ -0.68
RAPGEF3-218ENST00000548919 CEND1Q8N111 149 aa10.81□□□□□ -0.68
RAPGEF3-218ENST00000548919 RAB9AP51151 201 aa10.81□□□□□ -0.68
RAPGEF3-218ENST00000548919 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
RAPGEF3-218ENST00000548919 METTL26Q96S19 204 aa10.81□□□□□ -0.68
RAPGEF3-218ENST00000548919 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
RAPGEF3-218ENST00000548919 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
RAPGEF3-218ENST00000548919 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
RAPGEF3-218ENST00000548919 EEF1AKMT3Q96AZ1 226 aa10.79□□□□□ -0.68
RAPGEF3-218ENST00000548919 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
RAPGEF3-218ENST00000548919 A0A087WX48 190 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms