RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CEBPGP53567 150 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 CCL18P55774 89 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 DEFB1P60022 68 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 KRTAP10-2P60368 255 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 PSG9Q00887 426 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 ZNF90Q03938 601 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 BTN1A1Q13410 526 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 MIR17HGQ75NE6 70 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 OR51G1Q8NGK1 321 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 TCEAL7Q9BRU2 100 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 HIGD1AQ9Y241 93 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 LINC00588Q9Y4M8 146 aa9.46□□□□□ -0.9
CDX2-202ENST00000548877 A0A1W2PRE2 83 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 ZNF727A8MUV8 499 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 H3BQ15 152 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 SCO1O75880 301 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
CDX2-202ENST00000548877 ID1P41134 155 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 OR1B1Q8NGR6 318 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 TMEM37Q8WXS4 190 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 RPUSD4Q96CM3 377 aaKnown RBP9.45□□□□□ -0.9
CDX2-202ENST00000548877 SMCO4Q9NRQ5 59 aa9.45□□□□□ -0.9
CDX2-202ENST00000548877 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 A0A087WWC5 75 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 A0A0J9YX75 114 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 ORM2P19652 201 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 TSPOP30536 169 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 OR4B1Q8NGF8 309 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 IGF2BP2-AS1Q96M15 143 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 SMIM7Q9BQ49 75 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
CDX2-202ENST00000548877 C7orf77A4D0Y5 90 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 FAM74A7A6NL05 159 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 ISLRO14498 428 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 PSG1P11464 419 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 LYZP61626 148 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
CDX2-202ENST00000548877 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 OR51M1Q9H341 326 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 RPS10P5Q9NQ39 176 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 DOK5Q9P104 306 aa9.43□□□□□ -0.9
CDX2-202ENST00000548877 NUDT3O95989 172 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 UBE2G2P60604 165 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 EBLN2Q6P2I7 272 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 C11orf52Q96A22 123 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 FAM167A-AS1Q96KT0 104 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 SLC25A2Q9BXI2 301 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 KRTAP1-5Q9BYS1 174 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 Q9H3A6 140 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 Q9H8V8 135 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
CDX2-202ENST00000548877 A0A1W2PPQ1 181 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 EIF3GO75821 320 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDX2-202ENST00000548877 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 PARLQ9H300 379 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
CDX2-202ENST00000548877 CBY3A6NI87 242 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 F5H768 121 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 F6UB75 175 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
CDX2-202ENST00000548877 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 ATP5G1P05496 136 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 ATP5G3P48201 142 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 ZNF674Q2M3X9 581 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.4□□□□□ -0.9
CDX2-202ENST00000548877 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 SHANK2-AS3Q9BTD1 123 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 SLC25A39Q9BZJ4 359 aaPredicted RBP9.4□□□□□ -0.9
CDX2-202ENST00000548877 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.9
CDX2-202ENST00000548877 NDUFB4O95168 129 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 DEFB130BP0DP73 79 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 DEFB130AP0DP74 79 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 XGP55808 180 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 BPIFA4PQ86YQ2 179 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 TMEM208Q9BTX3 173 aa9.39□□□□□ -0.91
CDX2-202ENST00000548877 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
CDX2-202ENST00000548877 C9JCJ5 164 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 H3BRN7 92 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 PPP1R2P9O14990 202 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 S100A9P06702 114 aaKnown RBP9.38□□□□□ -0.91
CDX2-202ENST00000548877 OR10J4P0C629 311 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
CDX2-202ENST00000548877 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
CDX2-202ENST00000548877 MEOX2P50222 304 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms