RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ZZEF1O43149 2961 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 IGF2-ASQ6U949 168 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 OR11H6Q8NGC7 330 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 PRAC2D3DTV9 90 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 TRGV3P03979 118 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 IL17RELQ6ZVW7 336 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 NRACQ8N912 160 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 SH3BGRL2Q9UJC5 107 aa17.86■□□□□ 0.45
NPAS3-206ENST00000548645 TPRP12270 2363 aaKnown RBP17.85■□□□□ 0.45
NPAS3-206ENST00000548645 IGKV3D-20A0A0C4DH25 116 aa17.85■□□□□ 0.45
NPAS3-206ENST00000548645 AMTNQ6UX39 209 aa17.85■□□□□ 0.45
NPAS3-206ENST00000548645 LINC01619G3V211 115 aa17.85■□□□□ 0.45
NPAS3-206ENST00000548645 ATP6V0BQ99437 205 aa17.85■□□□□ 0.45
NPAS3-206ENST00000548645 AKAP13Q12802 2813 aa17.85■□□□□ 0.45
NPAS3-206ENST00000548645 NDPQ00604 133 aa17.84■□□□□ 0.45
NPAS3-206ENST00000548645 LY6G5BQ8NDX9 201 aa17.84■□□□□ 0.45
NPAS3-206ENST00000548645 TRBV7-3A0A075B6L6 115 aa17.84■□□□□ 0.45
NPAS3-206ENST00000548645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.84■□□□□ 0.45
NPAS3-206ENST00000548645 A0A1B0GWB2 263 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 H7C1H1 209 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 RAB9AP51151 201 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 PRO0461Q9UI25 63 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 UFC1Q9Y3C8 167 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 AGRNO00468 2067 aa17.83■□□□□ 0.44
NPAS3-206ENST00000548645 IGHV3OR16-8A0A075B7F1 116 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 CCDC144NLQ6NUI1 221 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 SPOCK3Q9BQ16 436 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 MGAQ8IWI9 3026 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 TRAV12-1A0A0B4J245 112 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 OR11H12B2RN74 326 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 F8VRH5 84 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 OR11H1Q8NG94 326 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 OR11H2Q8NH07 326 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 TRAV26-2A0A0B4J265 109 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 RNF182Q8N6D2 247 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 SLC50A1Q9BRV3 221 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 C11orf21Q9P2W6 132 aa17.82■□□□□ 0.44
NPAS3-206ENST00000548645 KALRNO60229 2985 aa17.81■□□□□ 0.44
NPAS3-206ENST00000548645 PCNX1Q96RV3 2341 aa17.81■□□□□ 0.44
NPAS3-206ENST00000548645 EFNA4P52798 201 aa17.81■□□□□ 0.44
NPAS3-206ENST00000548645 CEP295Q9C0D2 2601 aa17.81■□□□□ 0.44
NPAS3-206ENST00000548645 MYMXA0A1B0GTQ4 84 aa17.81■□□□□ 0.44
NPAS3-206ENST00000548645 IGHV3-35A0A0C4DH35 117 aa17.8■□□□□ 0.44
NPAS3-206ENST00000548645 CD3EP07766 207 aa17.8■□□□□ 0.44
NPAS3-206ENST00000548645 AGPAT4-IT1Q9H0P7 198 aa17.8■□□□□ 0.44
NPAS3-206ENST00000548645 IGHV7-4-1A0A0J9YVY3 117 aa17.79■□□□□ 0.44
NPAS3-206ENST00000548645 KLRD1Q13241 179 aa17.79■□□□□ 0.44
NPAS3-206ENST00000548645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.79■□□□□ 0.44
NPAS3-206ENST00000548645 BUB3O43684 328 aa17.78■□□□□ 0.44
NPAS3-206ENST00000548645 SPANXN1Q5VSR9 72 aa17.78■□□□□ 0.44
NPAS3-206ENST00000548645 MTURNQ8N3F0 131 aa17.78■□□□□ 0.44
NPAS3-206ENST00000548645 HOXA3O43365 443 aaPredicted RBP17.78■□□□□ 0.44
NPAS3-206ENST00000548645 TMEM78Q5T7P6 136 aa17.78■□□□□ 0.44
NPAS3-206ENST00000548645 IGHV4-4A0A075B6R2 117 aa17.78■□□□□ 0.44
NPAS3-206ENST00000548645 ODF3BA8MYP8 253 aa17.77■□□□□ 0.44
NPAS3-206ENST00000548645 MRAP2Q96G30 205 aa17.77■□□□□ 0.44
NPAS3-206ENST00000548645 SMIM2Q9BVW6 85 aa17.77■□□□□ 0.43
NPAS3-206ENST00000548645 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.76■□□□□ 0.43
NPAS3-206ENST00000548645 DMXL2Q8TDJ6 3036 aa17.76■□□□□ 0.43
NPAS3-206ENST00000548645 INSL3P51460 131 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 ORMDL2Q53FV1 153 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 CYSLTR1Q9Y271 337 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 APOMO95445 188 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 SCGB3A1Q96QR1 104 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 ZFAND3Q9H8U3 227 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 M0R1W7 72 aa17.75■□□□□ 0.43
NPAS3-206ENST00000548645 MORN3Q6PF18 240 aaPredicted RBP17.75■□□□□ 0.43
NPAS3-206ENST00000548645 PRTN3P24158 256 aa17.74■□□□□ 0.43
NPAS3-206ENST00000548645 TCTEX1D4Q5JR98 221 aa17.74■□□□□ 0.43
NPAS3-206ENST00000548645 SLC25A16P16260 332 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 CKS1BP61024 79 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 SCGB2A2Q13296 93 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 Q8N6K4 173 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 HIF1ANQ9NWT6 349 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 PGPEP1Q9NXJ5 209 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 RAXQ9Y2V3 346 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 LGALS1P09382 135 aaKnown RBP17.73■□□□□ 0.43
NPAS3-206ENST00000548645 ATP5G2Q06055 141 aa17.73■□□□□ 0.43
NPAS3-206ENST00000548645 TMEM238LA0A1B0GVL6 79 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 A6NJY4 79 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 ATP6V0E2Q8NHE4 81 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 TOMM6Q96B49 74 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 MRPL53Q96EL3 112 aaKnown RBP17.72■□□□□ 0.43
NPAS3-206ENST00000548645 C15orf32Q32M92 178 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 NEXN-AS1Q8NBZ9 246 aa17.72■□□□□ 0.43
NPAS3-206ENST00000548645 MRPL16Q9NX20 251 aaKnown RBP17.72■□□□□ 0.43
NPAS3-206ENST00000548645 IGHV7-81A0A0B4J1V7 117 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 IGHV3-66A0A0C4DH42 116 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 FOXI1Q12951 378 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 DLX4Q92988 240 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-206ENST00000548645 C1QTNF4Q9BXJ3 329 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 KLK15Q9H2R5 256 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 CLEC3BP05452 202 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 POLEQ07864 2286 aa17.71■□□□□ 0.43
NPAS3-206ENST00000548645 C9orf47Q6ZRZ4 202 aa17.7■□□□□ 0.42
NPAS3-206ENST00000548645 TRAV8-2A0A0B4J237 113 aa17.7■□□□□ 0.42
NPAS3-206ENST00000548645 H3BVH4 76 aa17.7■□□□□ 0.42
NPAS3-206ENST00000548645 EBI3Q14213 229 aa17.7■□□□□ 0.42
NPAS3-206ENST00000548645 CFAP126Q5VTH2 177 aa17.7■□□□□ 0.42
NPAS3-206ENST00000548645 OOSP1A8MZH6 123 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms