RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 Q8TAT8 98 aa10.14□□□□□ -0.79
PTCH1-215ENST00000547672 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
PTCH1-215ENST00000547672 CSMD2Q7Z408 3487 aa10.14□□□□□ -0.79
PTCH1-215ENST00000547672 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 OR4C46A6NHA9 309 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 INAFM1C9JVW0 142 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 SPINK4O60575 86 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 GPX1P07203 203 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 CSN3P07498 182 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 CRISP2P16562 243 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 PROK1P58294 105 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 FHL3Q13643 280 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
PTCH1-215ENST00000547672 DLX4Q92988 240 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-215ENST00000547672 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 RAX2Q96IS3 184 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-215ENST00000547672 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-215ENST00000547672 GPR61Q9BZJ8 451 aa10.12□□□□□ -0.79
PTCH1-215ENST00000547672 CAMPP49913 170 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 Q0VG73 95 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 DEFB114Q30KQ6 69 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 PSMG4Q5JS54 123 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 OR2K2Q8NGT1 345 aa10.11□□□□□ -0.79
PTCH1-215ENST00000547672 ZNF688P0C7X2 276 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 TFPI2P48307 235 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 AKR1D1P51857 326 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 CACNG7P62955 275 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 DMRTA1Q5VZB9 504 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 C18orf65Q6ZTR6 163 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 GATD1Q8NB37 220 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 FAM19A4Q96LR4 140 aa10.1□□□□□ -0.79
PTCH1-215ENST00000547672 SONP18583 2426 aaKnown RBP10.09□□□□□ -0.79
PTCH1-215ENST00000547672 A0A0J9YX75 114 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 CTRLP40313 264 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 ZNF80P51504 273 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-215ENST00000547672 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 ACANP16112 2415 aa10.09□□□□□ -0.79
PTCH1-215ENST00000547672 IGLC6P0CF74 106 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 GZMBP10144 247 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 ZFAND2AQ8N6M9 145 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
PTCH1-215ENST00000547672 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 KLLNB2CW77 178 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
PTCH1-215ENST00000547672 ADAMTSL5Q6ZMM2 481 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-215ENST00000547672 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
PTCH1-215ENST00000547672 AMBPP02760 352 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 ZNF705DP0CH99 300 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-215ENST00000547672 ZNF705BP0CI00 300 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-215ENST00000547672 EDN2P20800 178 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 S100A4P26447 101 aaKnown RBP10.06□□□□□ -0.8
PTCH1-215ENST00000547672 ASIPP42127 132 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 TWIST1Q15672 202 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 FAM159AQ6UWV7 190 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 HIST3H2BBQ8N257 126 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-215ENST00000547672 DUX3Q96PT4 197 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 NOTCH2Q04721 2471 aa10.06□□□□□ -0.8
PTCH1-215ENST00000547672 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-215ENST00000547672 C7orf71A4D174 169 aa10.05□□□□□ -0.8
PTCH1-215ENST00000547672 PPBPP02775 128 aa10.05□□□□□ -0.8
PTCH1-215ENST00000547672 CDKN1BP46527 198 aa10.05□□□□□ -0.8
PTCH1-215ENST00000547672 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
PTCH1-215ENST00000547672 SSBP4Q9BWG4 385 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-215ENST00000547672 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 F6UB75 175 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 ESDP10768 282 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 NTF3P20783 257 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 SRIP30626 198 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 DEFB131AP59861 70 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 SLAQ13239 276 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 NSUN5P1Q3KNT7 163 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-215ENST00000547672 FAM110AQ9BQ89 295 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-215ENST00000547672 TMEM191AQ9H0A3 160 aa10.04□□□□□ -0.8
PTCH1-215ENST00000547672 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
PTCH1-215ENST00000547672 SVEP1Q4LDE5 3571 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms