RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■■■□ 19.8
BRF1-212ENST00000547562 TFPI2P48307 235 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 STPG4Q8N801 248 aa11.87□□□□□ -0.51
BRF1-212ENST00000547562 NCR2O95944 276 aa11.86□□□□□ -0.51
BRF1-212ENST00000547562 C9orf139Q6ZV77 190 aa11.86□□□□□ -0.51
BRF1-212ENST00000547562 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
BRF1-212ENST00000547562 BLCAPP62952 87 aa11.86□□□□□ -0.51
BRF1-212ENST00000547562 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
BRF1-212ENST00000547562 DLEU1O43261 78 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 PPBPP02775 128 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 ACACBO00763 2458 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 PCP4P48539 62 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
BRF1-212ENST00000547562 C20orf173Q96LM9 149 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 KLK15Q9H2R5 256 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 GOLT1BQ9Y3E0 138 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 MYO18BQ8IUG5 2567 aa11.85□□□□□ -0.51
BRF1-212ENST00000547562 CRYBG3Q68DQ2 2970 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 B4DSR2 109 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 TCF21O43680 179 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 IGHV3-11P01762 117 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 SPOCK3Q9BQ16 436 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 MS4A6AQ9H2W1 248 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 AVPP01185 164 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 HBDP02042 147 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 PF4V1P10720 104 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 Q6ZS46 218 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 ZNF738Q8NE65 137 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 OR8A1Q8NGG7 326 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 TP73-AS1Q9UF72 201 aa11.84□□□□□ -0.51
BRF1-212ENST00000547562 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.52
BRF1-212ENST00000547562 UTP20O75691 2785 aaKnown RBP11.83□□□□□ -0.52
BRF1-212ENST00000547562 FOXE3Q13461 319 aa11.83□□□□□ -0.52
BRF1-212ENST00000547562 CBY1Q9Y3M2 126 aa11.83□□□□□ -0.52
BRF1-212ENST00000547562 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 OR4X2Q8NGF9 303 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 LENEPQ9Y5L5 61 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 IGHV7-4-1A0A0J9YVY3 117 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 SOCS3O14543 225 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 FXYD7P58549 80 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 GAGE1Q13065 139 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 NPFFR1Q9GZQ6 430 aa11.82□□□□□ -0.52
BRF1-212ENST00000547562 DSCR9P59020 149 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 Q6ZQT7 251 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 A0A0G2JLM5 398 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 PRR9Q5T870 116 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 LCNL1Q6ZST4 164 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 NRGNQ92686 78 aa11.81□□□□□ -0.52
BRF1-212ENST00000547562 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 GATA3P23771 443 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 LINC00477Q96M19 166 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 CFHR3Q02985 330 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 LGALS9CQ6DKI2 356 aa11.8□□□□□ -0.52
BRF1-212ENST00000547562 OVOL1O14753 267 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 EVI2AP22794 236 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 OR10J6PQ8NGY7 276 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 SNAI2O43623 268 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 ANKRD39Q53RE8 183 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 IFI27L1Q96BM0 104 aa11.79□□□□□ -0.52
BRF1-212ENST00000547562 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
BRF1-212ENST00000547562 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
BRF1-212ENST00000547562 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
BRF1-212ENST00000547562 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
BRF1-212ENST00000547562 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
BRF1-212ENST00000547562 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
BRF1-212ENST00000547562 SLC25A16P16260 332 aa11.78□□□□□ -0.52
BRF1-212ENST00000547562 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
BRF1-212ENST00000547562 CACNG7P62955 275 aa11.78□□□□□ -0.52
BRF1-212ENST00000547562 TM4SF20Q53R12 229 aa11.77□□□□□ -0.52
BRF1-212ENST00000547562 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.52
BRF1-212ENST00000547562 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.52
BRF1-212ENST00000547562 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.52
BRF1-212ENST00000547562 ZNF580Q9UK33 172 aa11.77□□□□□ -0.52
BRF1-212ENST00000547562 H3BVH4 76 aa11.77□□□□□ -0.53
BRF1-212ENST00000547562 COX8AP10176 69 aa11.77□□□□□ -0.53
BRF1-212ENST00000547562 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
BRF1-212ENST00000547562 DPF1Q92782 380 aa11.77□□□□□ -0.53
BRF1-212ENST00000547562 J3KRW8 73 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 DEFB1P60022 68 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 FCER1GP30273 86 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 LEPP41159 167 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 TMEM95Q3KNT9 176 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
BRF1-212ENST00000547562 USP9YO00507 2555 aaPredicted RBP11.75□□□□□ -0.53
BRF1-212ENST00000547562 TRAV21A0A0B4J279 112 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms