RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KCNIP2Q9NS61 270 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 HSPG2P98160 4391 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
CPSF6-204ENST00000547486 FFAR4Q5NUL3 377 aa9.17□□□□□ -0.94
CPSF6-204ENST00000547486 ST6GAL2Q96JF0 529 aa9.17□□□□□ -0.94
CPSF6-204ENST00000547486 PTTG2Q9NZH5 202 aa9.17□□□□□ -0.94
CPSF6-204ENST00000547486 MDFICQ9P1T7 246 aa9.17□□□□□ -0.94
CPSF6-204ENST00000547486 MUC4Q99102 2169 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 PAX4O43316 350 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 SSNA1O43805 119 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 RPL12P30050 165 aaKnown RBP9.16□□□□□ -0.94
CPSF6-204ENST00000547486 FHL2Q14192 279 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 ZNF266Q14584 549 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 LYPD1Q8N2G4 141 aa9.16□□□□□ -0.94
CPSF6-204ENST00000547486 A0A1W2PPQ1 181 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 CSN1S1P47710 185 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
CPSF6-204ENST00000547486 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 HYLS1Q96M11 299 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 ARPC5LQ9BPX5 153 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 HHLA3Q9XRX5 114 aa9.15□□□□□ -0.94
CPSF6-204ENST00000547486 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
CPSF6-204ENST00000547486 IFNA5P01569 189 aa9.14□□□□□ -0.95
CPSF6-204ENST00000547486 CRYBA4P53673 196 aa9.14□□□□□ -0.95
CPSF6-204ENST00000547486 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
CPSF6-204ENST00000547486 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
CPSF6-204ENST00000547486 PGPA6NDG6 321 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 LINC00315P59091 139 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 Q6AWC8 147 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 TVP23CQ96ET8 276 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 ICOSQ9Y6W8 199 aa9.13□□□□□ -0.95
CPSF6-204ENST00000547486 SIVA1O15304 175 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 GNRH2O43555 120 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 NXPH4O95158 308 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 SFTA3P0C7M3 94 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 PET100P0DJ07 73 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 BTF3P20290 206 aaKnown RBP9.12□□□□□ -0.95
CPSF6-204ENST00000547486 TAS2R45P59539 299 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 DEFA1P59665 94 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 DEFA3P59666 94 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 TMEM183BQ1AE95 376 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
CPSF6-204ENST00000547486 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 RASL10AQ92737 203 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 ZNF479Q96JC4 524 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 LENEPQ9Y5L5 61 aa9.12□□□□□ -0.95
CPSF6-204ENST00000547486 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
CPSF6-204ENST00000547486 RAB2AP61019 212 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 SLAQ13239 276 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 IQCF2Q8IXL9 164 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 TMED6Q8WW62 240 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 RPH3ALQ9UNE2 315 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
CPSF6-204ENST00000547486 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
CPSF6-204ENST00000547486 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 TRGV4A0A0C4DH28 118 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 MRPL23Q16540 153 aaKnown RBP9.1□□□□□ -0.95
CPSF6-204ENST00000547486 ACOT6Q3I5F7 207 aaPredicted RBP9.1□□□□□ -0.95
CPSF6-204ENST00000547486 TDRG1Q3Y452 100 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 FAM159AQ6UWV7 190 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 GOLT1AQ6ZVE7 132 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 NAGKQ9UJ70 344 aa9.1□□□□□ -0.95
CPSF6-204ENST00000547486 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 K7EQD1 137 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 GNG5P63218 68 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 NEGR1Q7Z3B1 354 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 OR10G9Q8NGN4 311 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 CMTM2Q8TAZ6 248 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 SPXQ9BT56 116 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 ALG5Q9Y673 324 aa9.09□□□□□ -0.95
CPSF6-204ENST00000547486 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
CPSF6-204ENST00000547486 F6UZH7 168 aa9.08□□□□□ -0.96
CPSF6-204ENST00000547486 GYPEP15421 78 aa9.08□□□□□ -0.96
CPSF6-204ENST00000547486 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
CPSF6-204ENST00000547486 Q5BKY6 102 aa9.07□□□□□ -0.96
CPSF6-204ENST00000547486 FAM74A1Q5RGS3 127 aa9.07□□□□□ -0.96
CPSF6-204ENST00000547486 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
CPSF6-204ENST00000547486 TREM1Q9NP99 234 aa9.07□□□□□ -0.96
CPSF6-204ENST00000547486 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms