RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 KIR3DP1A8MWS1 328 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 DNAJB13P59910 316 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 RPL37P61927 97 aaKnown RBP0.06□□□□□ -2.4
CCDC38-204ENST00000546816 SNRPD3P62318 126 aaKnown RBP0.06□□□□□ -2.4
CCDC38-204ENST00000546816 FXYD3Q14802 87 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 PPP1R2P3Q6NXS1 205 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 CCDC32Q9BV29 185 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 PCBD2Q9H0N5 130 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 C19orf12Q9NSK7 152 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 FKBP11Q9NYL4 201 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 MED31Q9Y3C7 131 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 MYH3P11055 1940 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 KIAA1549LQ6ZVL6 1849 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 SPTBP11277 2137 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 BDP1A6H8Y1 2624 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 LOC285556D6RIA3 1793 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 TRAV13-1A0A0B4J241 112 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 ARL5CA6NH57 179 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 BBIP1A8MTZ0 92 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 H3BMG7 143 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 IGF2P01344 180 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 SPINK6Q6UWN8 80 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 HRCT1Q6UXD1 115 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 C3orf62Q6ZUJ4 267 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 C5orf56Q8N8D9 126 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 THEM6Q8WUY1 208 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 ATPIF1Q9UII2 106 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 ANKRD31Q8N7Z5 1873 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 KNTC1P50748 2209 aa0.05□□□□□ -2.4
CCDC38-204ENST00000546816 LOC107984156A0A0G2JMH3 177 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 LOC107986453A0A1B0GWG9 222 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 PRORSD1PA6NEY8 169 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 FAM107AO95990 144 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 SLC25A4P12235 298 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 SRP9P49458 86 aaKnown RBP0.04□□□□□ -2.4
CCDC38-204ENST00000546816 POLR2HP52434 150 aaKnown RBP0.04□□□□□ -2.4
CCDC38-204ENST00000546816 ZNF56Q15929 161 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 ARL17AQ8IVW1 177 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 TEX29Q8N6K0 151 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 LXNQ9BS40 222 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 MRPL36Q9P0J6 103 aaKnown RBP0.04□□□□□ -2.4
CCDC38-204ENST00000546816 COMMD3Q9UBI1 195 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 SMPXQ9UHP9 88 aa0.04□□□□□ -2.4
CCDC38-204ENST00000546816 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.03□□□□□ -2.4
CCDC38-204ENST00000546816 LOC107984640A0A0U1RRK4 108 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 LOC101927531A0A1B0GV80 90 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 IFITM5A6NNB3 132 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 HIGD1CA8MV81 97 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 E7EQ34 232 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 PFDN1O60925 122 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 CRYGSP22914 178 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 BLCAPP62952 87 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 OR51A4Q8NGJ6 313 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 NAT14Q8WUY8 206 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 CBLN4Q9NTU7 201 aa0.03□□□□□ -2.4
CCDC38-204ENST00000546816 NUP210Q8TEM1 1887 aaPredicted RBP0.02□□□□□ -2.41
CCDC38-204ENST00000546816 TMEM30CPA0ZSE6 113 aa0.02□□□□□ -2.41
CCDC38-204ENST00000546816 TMEM189A5PLL7 270 aa0.02□□□□□ -2.41
CCDC38-204ENST00000546816 RPL7P18124 248 aaKnown RBP0.02□□□□□ -2.41
CCDC38-204ENST00000546816 GTF2A1P52655 376 aaPredicted RBP0.02□□□□□ -2.41
CCDC38-204ENST00000546816 LYPD5Q6UWN5 251 aa0.02□□□□□ -2.41
CCDC38-204ENST00000546816 BCORL1Q5H9F3 1711 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 LRP1Q07954 4544 aaKnown RBP0.01□□□□□ -2.41
CCDC38-204ENST00000546816 TPST1O60507 370 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 EDF1O60869 148 aaKnown RBP0.01□□□□□ -2.41
CCDC38-204ENST00000546816 ETV6P41212 452 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 RHOHQ15669 191 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 OR8J3Q8NGG0 315 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 DMAC1Q96GE9 116 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 TRAPPC2LQ9UL33 140 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 A2MP01023 1474 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 ANK1P16157 1881 aa0.01□□□□□ -2.41
CCDC38-204ENST00000546816 A0A096LNT2 108 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 WDR97A6NE52 1622 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 M0QZK8 103 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 CDC42EP2O14613 210 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 IGKCP01834 107 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 HBDP02042 147 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 RPL22P35268 128 aaKnown RBP0□□□□□ -2.41
CCDC38-204ENST00000546816 TOMM20LQ6UXN7 152 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 SREK1IP1Q8N9Q2 155 aaPredicted RBP0□□□□□ -2.41
CCDC38-204ENST00000546816 OR5A2Q8NGI9 324 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 OR9Q1Q8NGQ5 310 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 SMIM7Q9BQ49 75 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 CENPHQ9H3R5 247 aa0□□□□□ -2.41
CCDC38-204ENST00000546816 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 PTPRGP23470 1445 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 CPDO75976 1380 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 A0A0G2JMM0 328 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 A0A1B0GV72 72 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 PGRMC1O00264 195 aaKnown RBP-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 FABP1P07148 127 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 LSM3P62310 102 aaKnown RBP-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 TFAMQ00059 246 aaKnown RBP-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 KLKP1Q107X0 134 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 Q5XG85 94 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 OTOSQ8NHW6 89 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 BRK1Q8WUW1 75 aa-0.01□□□□□ -2.41
CCDC38-204ENST00000546816 BLMP54132 1417 aaPredicted RBP-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 TANC2Q9HCD6 1990 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms