RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 NXPH4O95158 308 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 ZNF138P52744 262 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 CRYBA4P53673 196 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 H2BFSP57053 126 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 MDFICQ9P1T7 246 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 SIVA1O15304 175 aa12.72□□□□□ -0.37
CHERP-204ENST00000546538 PAX4O43316 350 aa12.72□□□□□ -0.37
CHERP-204ENST00000546538 S100ZQ8WXG8 99 aa12.72□□□□□ -0.37
CHERP-204ENST00000546538 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
CHERP-204ENST00000546538 MRPL32Q9BYC8 188 aaKnown RBP12.72□□□□□ -0.37
CHERP-204ENST00000546538 MUC21Q5SSG8 566 aa12.71□□□□□ -0.37
CHERP-204ENST00000546538 SLC25A31Q9H0C2 315 aa12.71□□□□□ -0.37
CHERP-204ENST00000546538 ICOSQ9Y6W8 199 aa12.71□□□□□ -0.37
CHERP-204ENST00000546538 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 UPK1BO75841 260 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 RANP62826 216 aaKnown RBP12.71□□□□□ -0.38
CHERP-204ENST00000546538 ZNF266Q14584 549 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 LYPD5Q6UWN5 251 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 PRO0255Q9UI72 69 aa12.71□□□□□ -0.38
CHERP-204ENST00000546538 PRAF2O60831 178 aa12.7□□□□□ -0.38
CHERP-204ENST00000546538 SFTA3P0C7M3 94 aa12.7□□□□□ -0.38
CHERP-204ENST00000546538 HHLA3Q9XRX5 114 aa12.7□□□□□ -0.38
CHERP-204ENST00000546538 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 OR7C2O60412 319 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 ENKURQ8TC29 256 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 ZNF479Q96JC4 524 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 ARPC5LQ9BPX5 153 aa12.69□□□□□ -0.38
CHERP-204ENST00000546538 DIRC3C9JPN6 131 aa12.68□□□□□ -0.38
CHERP-204ENST00000546538 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
CHERP-204ENST00000546538 ZNF415Q09FC8 603 aa12.68□□□□□ -0.38
CHERP-204ENST00000546538 Q6AWC8 147 aa12.68□□□□□ -0.38
CHERP-204ENST00000546538 ATP5SQ99766 215 aa12.68□□□□□ -0.38
CHERP-204ENST00000546538 FFAR4Q5NUL3 377 aa12.67□□□□□ -0.38
CHERP-204ENST00000546538 WFDC1Q9HC57 220 aa12.67□□□□□ -0.38
CHERP-204ENST00000546538 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
CHERP-204ENST00000546538 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
CHERP-204ENST00000546538 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 K7EQD1 137 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 DNAH10OSP0CZ25 163 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 RASL10AQ92737 203 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 SMIM3Q9BZL3 60 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 VPS13BQ7Z7G8 4022 aa12.66□□□□□ -0.38
CHERP-204ENST00000546538 MPC2O95563 127 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
CHERP-204ENST00000546538 TMEM183BQ1AE95 376 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 IQCF2Q8IXL9 164 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 TMEM183AQ8IXX5 376 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 OR10G4Q8NGN3 311 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 DNAH8Q96JB1 4490 aa12.65□□□□□ -0.38
CHERP-204ENST00000546538 C17orf112F2Z3M2 114 aa12.64□□□□□ -0.39
CHERP-204ENST00000546538 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
CHERP-204ENST00000546538 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
CHERP-204ENST00000546538 CSN1S1P47710 185 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 XGP55808 180 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 SLAQ13239 276 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 TDRG1Q3Y452 100 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 HYLS1Q96M11 299 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
CHERP-204ENST00000546538 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 LOC100131303A0A0U1RQF7 123 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 GNRH2O43555 120 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 KHDC3LQ587J8 217 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 A0A087WTM6 91 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 GYPEP15421 78 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
CHERP-204ENST00000546538 TMED6Q8WW62 240 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
CHERP-204ENST00000546538 PGPA6NDG6 321 aa12.61□□□□□ -0.39
CHERP-204ENST00000546538 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
CHERP-204ENST00000546538 FAM159AQ6UWV7 190 aa12.61□□□□□ -0.39
CHERP-204ENST00000546538 SPXQ9BT56 116 aa12.61□□□□□ -0.39
CHERP-204ENST00000546538 NAGKQ9UJ70 344 aa12.61□□□□□ -0.39
CHERP-204ENST00000546538 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 F6UZH7 168 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 SRIP30626 198 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 RAB2AP61019 212 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 GNG5P63218 68 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 RPH3ALQ9UNE2 315 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
CHERP-204ENST00000546538 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
CHERP-204ENST00000546538 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
CHERP-204ENST00000546538 TYMSP04818 313 aa12.59□□□□□ -0.39
CHERP-204ENST00000546538 SSNA1O43805 119 aa12.58□□□□□ -0.4
CHERP-204ENST00000546538 IFNA5P01569 189 aa12.58□□□□□ -0.4
CHERP-204ENST00000546538 TAS2R45P59539 299 aa12.58□□□□□ -0.4
CHERP-204ENST00000546538 SCGB1C1Q8TD33 95 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms