RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 ZFP30Q9Y2G7 519 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 KLLNB2CW77 178 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 INSP01308 110 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 PRB4P10163 310 aaPredicted RBP8.63□□□□□ -1.03
LTBR-214ENST00000545445 TAS2R60P59551 318 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 PEA15Q15121 130 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 RARRES2Q99969 163 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 XCL2Q9UBD3 114 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 AGRNO00468 2067 aa8.63□□□□□ -1.03
LTBR-214ENST00000545445 M0R2Z0 102 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 GPX1P07203 203 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 FXYD7P58549 80 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 Q8TAT8 98 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 RNF183Q96D59 192 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 LINC00479Q96M42 142 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 MED9Q9NWA0 146 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 GOLT1BQ9Y3E0 138 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
LTBR-214ENST00000545445 TRAV34A0A0B4J273 112 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 RAB19A4D1S5 217 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 CRXO43186 299 aaPredicted RBP8.61□□□□□ -1.03
LTBR-214ENST00000545445 SPRY2O43597 315 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 LTAP01374 205 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 Q86TA4 180 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
LTBR-214ENST00000545445 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 C7orf71A4D174 169 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
LTBR-214ENST00000545445 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 ZNF705AQ6ZN79 300 aaPredicted RBP8.6□□□□□ -1.03
LTBR-214ENST00000545445 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 RETNQ9HD89 108 aa8.6□□□□□ -1.03
LTBR-214ENST00000545445 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 H7BYZ3 331 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
LTBR-214ENST00000545445 Q6AWC8 147 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 BAGE2Q86Y30 109 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 TMEM183AQ8IXX5 376 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 NEU1Q99519 415 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
LTBR-214ENST00000545445 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 TRAV21A0A0B4J279 112 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 J3KRW8 73 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 ZNF324O75467 553 aaPredicted RBP8.58□□□□□ -1.04
LTBR-214ENST00000545445 SRP19P09132 144 aaKnown RBP8.58□□□□□ -1.04
LTBR-214ENST00000545445 GNG4P50150 75 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 LINC01587Q99440 93 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 PYGO2Q9BRQ0 406 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 BIN3Q9NQY0 253 aa8.58□□□□□ -1.04
LTBR-214ENST00000545445 KMT2AQ03164 3969 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 FABP5P3A8MUU1 101 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 C9JCJ5 164 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 GCGP01275 180 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
LTBR-214ENST00000545445 MIFP14174 115 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 FAM74A3Q4VXF1 159 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 IL17DQ8TAD2 202 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 PARLQ9H300 379 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
LTBR-214ENST00000545445 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
LTBR-214ENST00000545445 LY6G6CO95867 125 aa8.56□□□□□ -1.04
LTBR-214ENST00000545445 PRR9Q5T870 116 aa8.56□□□□□ -1.04
LTBR-214ENST00000545445 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
LTBR-214ENST00000545445 LY96Q9Y6Y9 160 aa8.56□□□□□ -1.04
LTBR-214ENST00000545445 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
LTBR-214ENST00000545445 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
LTBR-214ENST00000545445 CEBPGP53567 150 aa8.55□□□□□ -1.04
LTBR-214ENST00000545445 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
LTBR-214ENST00000545445 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
LTBR-214ENST00000545445 RRN3P1Q2M238 152 aa8.55□□□□□ -1.04
LTBR-214ENST00000545445 ZNF674Q2M3X9 581 aa8.55□□□□□ -1.04
LTBR-214ENST00000545445 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms