RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 PRB4P10163 310 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-221ENST00000544983 RNASE4P34096 147 aaKnown RBP8.52□□□□□ -1.05
SNHG1-221ENST00000544983 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 Q6AWC8 147 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 FAM210AQ96ND0 272 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 LINC01587Q99440 93 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 LINC00467Q9BRT7 94 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
SNHG1-221ENST00000544983 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 RETNQ9HD89 108 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 X6R8D5 127 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 IGHV3OR16-12A0A075B7B8 117 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 TRAV12-3A0A0B4J271 114 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 ZNF324O75467 553 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-221ENST00000544983 SMUG1Q53HV7 270 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 ZNF493Q6ZR52 646 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 Q86TA4 180 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 SMIM12Q96EX1 92 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
SNHG1-221ENST00000544983 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
SNHG1-221ENST00000544983 TRAV34A0A0B4J273 112 aa8.5□□□□□ -1.05
SNHG1-221ENST00000544983 TEX48A0A1B0GUV7 120 aa8.5□□□□□ -1.05
SNHG1-221ENST00000544983 LTAP01374 205 aa8.5□□□□□ -1.05
SNHG1-221ENST00000544983 Q8NAQ8 132 aa8.5□□□□□ -1.05
SNHG1-221ENST00000544983 TVP23CQ96ET8 276 aa8.5□□□□□ -1.05
SNHG1-221ENST00000544983 J3KRW8 73 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 RGS13O14921 159 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
SNHG1-221ENST00000544983 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
SNHG1-221ENST00000544983 BTN1A1Q13410 526 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 CLLU1Q5K131 121 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 BAGE2Q86Y30 109 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 EIF4E3Q8N5X7 224 aaKnown RBP8.49□□□□□ -1.05
SNHG1-221ENST00000544983 IL17DQ8TAD2 202 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 SGK494Q96LW2 274 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
SNHG1-221ENST00000544983 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 FABP5P3A8MUU1 101 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 GCGP01275 180 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 RBMY1A1P0DJD3 496 aaKnown RBP8.48□□□□□ -1.05
SNHG1-221ENST00000544983 RBMY1CP0DJD4 496 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 IFITM2Q01629 132 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 PEA15Q15121 130 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 RBMY1FQ15415 496 aaKnown RBP8.48□□□□□ -1.05
SNHG1-221ENST00000544983 TDRG1Q3Y452 100 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 TOR2AQ5JU69 321 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 PRR9Q5T870 116 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 FAM159AQ6UWV7 190 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
SNHG1-221ENST00000544983 C16orf74Q96GX8 76 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
SNHG1-221ENST00000544983 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 A0A0J9YWU9 116 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 GNG4P50150 75 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
SNHG1-221ENST00000544983 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 ZNF705GA8MUZ8 300 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-221ENST00000544983 C9JCJ5 164 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 HTN1P15515 57 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 ZNF674Q2M3X9 581 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
SNHG1-221ENST00000544983 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
SNHG1-221ENST00000544983 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 TP53TG3Q9ULZ0 132 aa8.46□□□□□ -1.06
SNHG1-221ENST00000544983 TIMM8BQ9Y5J9 83 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-221ENST00000544983 DNAH9Q9NYC9 4486 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 CBY3A6NI87 242 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 SPART-AS1P0CW21 52 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
SNHG1-221ENST00000544983 FAM74A3Q4VXF1 159 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
SNHG1-221ENST00000544983 ZC2HC1AQ96GY0 325 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 DERL1Q9BUN8 251 aa8.45□□□□□ -1.06
SNHG1-221ENST00000544983 SNURFLB1AK76 121 aa8.44□□□□□ -1.06
SNHG1-221ENST00000544983 SRP19P09132 144 aaKnown RBP8.44□□□□□ -1.06
SNHG1-221ENST00000544983 ZNF80P51504 273 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-221ENST00000544983 PARLQ9H300 379 aa8.44□□□□□ -1.06
SNHG1-221ENST00000544983 LY96Q9Y6Y9 160 aa8.44□□□□□ -1.06
SNHG1-221ENST00000544983 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 AZU1P20160 251 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 ZNF415Q09FC8 603 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1901.6 ms