RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 MRPL57Q9BQC6 102 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 DERL1Q9BUN8 251 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 TMEM147Q9BVK8 224 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 C11orf68Q9H3H3 251 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 TRABDQ9H4I3 376 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 FAIMQ9NVQ4 179 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 OR5AC2Q9NZP5 309 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 C22orf24Q9Y442 160 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 DOCK4Q8N1I0 1966 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 TRAV3A0A0B4J244 114 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 A0A1B0GV50 99 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 C1orf196B1AJZ1 125 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 PSMD12O00232 456 aaPredicted RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 KPNA3O00505 521 aaPredicted RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 FAAHO00519 579 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 FADS1O60427 444 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 TNFP01375 233 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 IFNA5P01569 189 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 IGKV1-5P01602 117 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 IFNA6P05013 189 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 ISG15P05161 165 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 ASAH2BP0C7U1 165 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 MGST1P10620 155 aaKnown RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 RPL5P46777 297 aaKnown RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 CAPZBP47756 277 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 RPS20P60866 119 aaKnown RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 STX5Q13190 355 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 PMAIP1Q13794 54 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 ZNF846Q147U1 533 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 RNASE10Q5GAN6 216 aaKnown RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 TEX36Q5VZQ5 186 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 SPOPLQ6IQ16 392 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 ALKAL1Q6UXT8 129 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 OOSP2Q86WS3 158 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 NDUFA11Q86Y39 141 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 PDZD9Q8IXQ8 264 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 OR4E2Q8NGC2 313 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 MRPL30Q8TCC3 161 aaKnown RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 WFDC5Q8TCV5 224 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 AQP3Q92482 292 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 SLC35B4Q969S0 331 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 SCGB3A1Q96QR1 104 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 SLC50A1Q9BRV3 221 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 PARD6GQ9BYG4 376 aaPredicted RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 LINC00846Q9NV44 126 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 V9GYY5 206 aaPredicted RBP0.44□□□□□ -2.34
YBX3-214ENST00000544501 SPTBP11277 2137 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 TCHHQ07283 1943 aa0.44□□□□□ -2.34
YBX3-214ENST00000544501 TRAV9-1A0A075B6T8 112 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 TRBV6-7A0A0A0MS04 114 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 IGKV1-9A0A0C4DH69 117 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 DPRXA6NFQ7 191 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 LYNX1G3V0Z9 82 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 DCTN3O75935 186 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 OR5F1O95221 314 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 AHSA1O95433 338 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 HLA-DRB1P01911 266 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CLPSP04118 112 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H1EP10412 219 aaKnown RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 CD79AP11912 226 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 COX6A1P12074 109 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 BRS3P32247 399 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 ZNF93P35789 620 aaPredicted RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 NKX2-5P52952 324 aaPredicted RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 RAB5BP61020 215 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 SNRPD2P62316 118 aaKnown RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 UBE2IP63279 158 aaKnown RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 CCL20P78556 96 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 SPANXN3Q5MJ09 141 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CCDC122Q5T0U0 273 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 LPCAT3Q6P1A2 487 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 DPPA3Q6W0C5 159 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 C1orf158Q8N1D5 194 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 FAM19A2Q8N3H0 131 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 TMEM86BQ8N661 226 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 OR5A1Q8NGJ0 315 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 RASSF5Q8WWW0 418 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 POP5Q969H6 163 aaKnown RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 PPP1R14BQ96C90 147 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CCDC42Q96M95 316 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 NABP2Q9BQ15 211 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CCDC94Q9BW85 323 aaPredicted RBP0.43□□□□□ -2.34
YBX3-214ENST00000544501 COMMD5Q9GZQ3 224 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CBLN4Q9NTU7 201 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 SLC39A9Q9NUM3 307 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 UBAP1Q9NZ09 502 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 CKLFQ9UBR5 152 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 ERGIC3Q9Y282 383 aa0.43□□□□□ -2.34
YBX3-214ENST00000544501 NINQ8N4C6 2090 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 A0A087WX48 190 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 FAM236DA0A1B0GTK5 79 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 EXOC1LA0A1B0GW35 172 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 FAM92AA1XBS5 289 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 E7EQ34 232 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 M0R2N4 97 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 CHP2O43745 196 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 SMIM17P0DL12 118 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 FAM236CP0DP71 79 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms