RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 GATD1Q8NB37 220 aa9.52□□□□□ -0.89
LRTOMT-221ENST00000544409 IGKV2-40A0A087WW87 121 aaPredicted RBP9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 C19orf84I3L1E1 186 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 NPFFO15130 113 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 IGKV2D-40P01614 121 aaPredicted RBP9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 GNLYP22749 145 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 FXYD2P54710 66 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 KLK9Q2XQG4 91 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 TPPP3Q9BW30 176 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 SS18L2Q9UHA2 77 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 KLK9Q9UKQ9 250 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 H3BMG7 143 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 SH2D1AO60880 128 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
LRTOMT-221ENST00000544409 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 OR4X2Q8NGF9 303 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 CACNG7P62955 275 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 COX8CQ7Z4L0 72 aa9.5□□□□□ -0.89
LRTOMT-221ENST00000544409 IGHV3OR16-8A0A075B7F1 116 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 CLEC3BP05452 202 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 PRR25Q96S07 402 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 LOXL1Q08397 574 aaPredicted RBP9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 A6NJY4 79 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 NHP2Q9NX24 153 aaKnown RBP9.49□□□□□ -0.89
LRTOMT-221ENST00000544409 MED13LQ71F56 2210 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 EEF1AKMT3Q96AZ1 226 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 MRPL16Q9NX20 251 aaKnown RBP9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 F8W1H4 67 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 G3V318 75 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 IGHV4-39P01824 125 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 CLEC19AQ6UXS0 136 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
LRTOMT-221ENST00000544409 HLA-DMBP28068 263 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 IGHG4P01861 327 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 Q8TAT8 98 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 LINC01548A6NM66 108 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 SIVA1O15304 175 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 BUB3O43684 328 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
LRTOMT-221ENST00000544409 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.89
LRTOMT-221ENST00000544409 SPINK8P0C7L1 97 aa9.46□□□□□ -0.89
LRTOMT-221ENST00000544409 RNF183Q96D59 192 aa9.46□□□□□ -0.89
LRTOMT-221ENST00000544409 MOB4Q9Y3A3 225 aa9.46□□□□□ -0.89
LRTOMT-221ENST00000544409 PAX8Q06710 450 aa9.46□□□□□ -0.9
LRTOMT-221ENST00000544409 DPF1Q92782 380 aa9.46□□□□□ -0.9
LRTOMT-221ENST00000544409 SLC50A1Q9BRV3 221 aa9.46□□□□□ -0.9
LRTOMT-221ENST00000544409 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 TMEM219Q86XT9 240 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 PIMREGQ9BSJ6 248 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 A0A096LNJ9 63 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 TSPAN13O95857 204 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 SRSF2Q01130 221 aaKnown RBP9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 METTL26Q96S19 204 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 DKK2Q9UBU2 259 aa9.45□□□□□ -0.9
LRTOMT-221ENST00000544409 IGHV1-69DA0A0B4J2H0 117 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 IGHV1-69P01742 117 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 SYT8Q8NBV8 401 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 ACACBO00763 2458 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 ZNF418Q8TF45 676 aaPredicted RBP9.44□□□□□ -0.9
LRTOMT-221ENST00000544409 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 D6R8Y8 96 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 ERCC8Q13216 396 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 U3KQK5 164 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 FABP5P3A8MUU1 101 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
LRTOMT-221ENST00000544409 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms