RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 MYOFQ9NZM1 2061 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 UBE2AP49459 152 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 Q6ZWC4 215 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 ASCC3Q8N3C0 2202 aaKnown RBP8.29□□□□□ -1.08
PCDH9-204ENST00000544246 A0A0G2JRQ6 117 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 C5orf24Q7Z6I8 188 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
PCDH9-204ENST00000544246 WIPF3A6NGB9 483 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-204ENST00000544246 FAM231DQ6ZW35 169 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 Q96MF0 132 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 PNRC2Q9NPJ4 139 aaKnown RBP8.28□□□□□ -1.08
PCDH9-204ENST00000544246 AMTNQ6UX39 209 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 NDUFS7O75251 213 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
PCDH9-204ENST00000544246 NDUFA4L2Q9NRX3 87 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 HEATR5BQ9P2D3 2071 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 EP400Q96L91 3159 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 H0YGX0 51 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 V9GYV3 84 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 MUC6Q6W4X9 2439 aa8.28□□□□□ -1.08
PCDH9-204ENST00000544246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.08
PCDH9-204ENST00000544246 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.08
PCDH9-204ENST00000544246 G3V318 75 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 TMEM14BQ9NUH8 114 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 ANKRD36A6QL64 1941 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 CACNA1EQ15878 2313 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 IGHV7-4-1A0A0J9YVY3 117 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 ARID1AO14497 2285 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 CACNA1IQ9P0X4 2223 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 IGHV2-70DA0A0C4DH43 119 aa8.27□□□□□ -1.09
PCDH9-204ENST00000544246 LY6HO94772 140 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 BRK1Q8WUW1 75 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 E7EQL1 145 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 C5orf63A6NC05 138 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 J3QLI3 93 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 ZNF493Q6ZR52 646 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 VOPP1Q96AW1 172 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
PCDH9-204ENST00000544246 C9JQL5 133 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 ZFP2Q6ZN57 461 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 U3KQE9 123 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 Q0VFX4 171 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 FLVCR1-AS1Q8TAF5 88 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 ICOSQ9Y6W8 199 aa8.26□□□□□ -1.09
PCDH9-204ENST00000544246 IGLL5B9A064 214 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 J3QKU1 62 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 K7ERS5 55 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 FOXE3Q13461 319 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 Q6ZRM9 215 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 K7EMI3 77 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 QRFPP83859 136 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 ETV2O00321 342 aaPredicted RBP8.25□□□□□ -1.09
PCDH9-204ENST00000544246 LTAP01374 205 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 IL15RAQ13261 267 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 NCR3O14931 201 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 ZNRD1Q9P1U0 126 aa8.25□□□□□ -1.09
PCDH9-204ENST00000544246 TAX1BP3O14907 124 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 NUP214P35658 2090 aaPredicted RBP8.24□□□□□ -1.09
PCDH9-204ENST00000544246 FAM236AA0A1B0GUQ0 79 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 FAM236BA0A1B0GV22 79 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 IGLC7A0M8Q6 106 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 WIPF2Q8TF74 440 aaPredicted RBP8.24□□□□□ -1.09
PCDH9-204ENST00000544246 RLFQ13129 1914 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 MAPK1IP1LQ8NDC0 245 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 PATJQ8NI35 1801 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 COX7A2LO14548 114 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
PCDH9-204ENST00000544246 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 CCL25O15444 150 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 CR1LQ2VPA4 569 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 MESP1Q9BRJ9 268 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 ZNF581Q9P0T4 197 aa8.24□□□□□ -1.09
PCDH9-204ENST00000544246 H0Y9J4 135 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 IGLV2-23P01705 113 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 ACACAQ13085 2346 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 CCL18P55774 89 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 LINC01620Q4KN68 170 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 WDR86Q86TI4 376 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 C11orf52Q96A22 123 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 HIST2H2BCQ6DN03 193 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 DUX4L9Q6RFH8 374 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-204ENST00000544246 K7EM74 188 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 K7EQD1 137 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
PCDH9-204ENST00000544246 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms