RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TOR2AQ5JU69 321 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 PRR9Q5T870 116 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 Q86TA4 180 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 C2CD4CQ8TF44 421 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 TVP23CQ96ET8 276 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 C8orf49Q96NF6 230 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 X6R8D5 127 aa10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1A-216ENST00000543995 H7BYZ3 331 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 MIFP14174 115 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 TMEM183BQ1AE95 376 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 FAM210AQ96ND0 272 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 MED9Q9NWA0 146 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 RRN3P1Q2M238 152 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 NEU1Q99519 415 aa10.48□□□□□ -0.73
TNFRSF1A-216ENST00000543995 IGHV4-28A0A0C4DH34 117 aa10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 ZNF705GA8MUZ8 300 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 DEFB4AO15263 64 aa10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 ZNF324O75467 553 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 RPL35P42766 123 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 SMUG1Q53HV7 270 aa10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
TNFRSF1A-216ENST00000543995 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 GCGP01275 180 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 LTAP01374 205 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PRM2P04554 102 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TAS2R60P59551 318 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 CLLU1Q5K131 121 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 Q6AWC8 147 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 Q8NAQ8 132 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 DERL1Q9BUN8 251 aa10.46□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TRAV21A0A0B4J279 112 aa10.45□□□□□ -0.74
TNFRSF1A-216ENST00000543995 Q6ZQT7 251 aa10.45□□□□□ -0.74
TNFRSF1A-216ENST00000543995 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
TNFRSF1A-216ENST00000543995 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
TNFRSF1A-216ENST00000543995 CBY3A6NI87 242 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 CEBPGP53567 150 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 EMP1P54849 157 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 MUC21Q5SSG8 566 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 NBEAL2Q6ZNJ1 2754 aa10.44□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TMEM250H0YL14 139 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PFN1P07737 140 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 ZNF80P51504 273 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 ZNF674Q2M3X9 581 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 CENPWQ5EE01 88 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TMEM183AQ8IXX5 376 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 RAB19A4D1S5 217 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 AZU1P20160 251 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 GNG4P50150 75 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 ZC2HC1AQ96GY0 325 aa10.43□□□□□ -0.74
TNFRSF1A-216ENST00000543995 FABP5P3A8MUU1 101 aa10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PEA15Q15121 130 aa10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TMEM263Q8WUH6 116 aaKnown RBP10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 LINC00467Q9BRT7 94 aa10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PARLQ9H300 379 aa10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 EDA2RQ9HAV5 297 aa10.42□□□□□ -0.74
TNFRSF1A-216ENST00000543995 ZNF493Q6ZR52 646 aa10.41□□□□□ -0.74
TNFRSF1A-216ENST00000543995 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
TNFRSF1A-216ENST00000543995 NDUFS6O75380 124 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 SRP19P09132 144 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 MGST1P10620 155 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 SRSF3P84103 164 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 ANXA2RQ3ZCQ2 193 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 KCNS1Q96KK3 526 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.74
TNFRSF1A-216ENST00000543995 TENM3Q9P273 2699 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SH2D1AO60880 128 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 CRIP1P50238 77 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 C11orf45Q8TAV5 145 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 MLST8Q9BVC4 326 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TRBV20OR9-2A0A075B6H5 130 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 PGPEP1LA6NFU8 196 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 ORM1P02763 201 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SPART-AS1P0CW21 52 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms