RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PLAC8L1A1L4L8 177 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 TMEM189A5PLL7 270 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 F6UZH7 168 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 PPT1P50897 306 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 FLI1Q01543 452 aaPredicted RBP10.81□□□□□ -0.68
CD9-210ENST00000543916 PMS2P11Q13670 270 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 HIST1H2BAQ96A08 127 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 GNG13Q9P2W3 67 aa10.81□□□□□ -0.68
CD9-210ENST00000543916 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 PRNTQ86SH4 94 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
CD9-210ENST00000543916 C8orf49Q96NF6 230 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 PYGO2Q9BRQ0 406 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 MANBALQ9NQG1 85 aa10.8□□□□□ -0.68
CD9-210ENST00000543916 STARD9Q9P2P6 4700 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 CXorf65A6NEN9 183 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 C11orf94C9JXX5 98 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 FAM222AQ5U5X8 452 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 Q6AWC8 147 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 ZNF767PQ75MW2 155 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 Q86TA4 180 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 DKK2Q9UBU2 259 aa10.79□□□□□ -0.68
CD9-210ENST00000543916 SCO2A0A1W2PP80 73 aa10.78□□□□□ -0.68
CD9-210ENST00000543916 FBLL1A6NHQ2 334 aaKnown RBP10.78□□□□□ -0.68
CD9-210ENST00000543916 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
CD9-210ENST00000543916 TMEM263Q8WUH6 116 aaKnown RBP10.78□□□□□ -0.68
CD9-210ENST00000543916 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
CD9-210ENST00000543916 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
CD9-210ENST00000543916 RGS13O14921 159 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
CD9-210ENST00000543916 BLOC1S1P78537 153 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 Q6ZTC4 211 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
CD9-210ENST00000543916 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 TP53TG3Q9ULZ0 132 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
CD9-210ENST00000543916 IGHV1OR15-1A0A075B7D0 117 aa10.76□□□□□ -0.69
CD9-210ENST00000543916 CBY3A6NI87 242 aa10.76□□□□□ -0.69
CD9-210ENST00000543916 AKR1C3P42330 323 aa10.76□□□□□ -0.69
CD9-210ENST00000543916 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
CD9-210ENST00000543916 MUC21Q5SSG8 566 aa10.76□□□□□ -0.69
CD9-210ENST00000543916 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
CD9-210ENST00000543916 TRBV6-1A0A0K0K1D8 114 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 GCGP01275 180 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 IFNA1P01562 189 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 BCL2P10415 239 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 UBE2G1P62253 170 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 SMUG1Q53HV7 270 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 SAPCD1Q5SSQ6 148 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 C11orf72Q8NBR9 251 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
CD9-210ENST00000543916 TIMM8BQ9Y5J9 83 aaPredicted RBP10.75□□□□□ -0.69
CD9-210ENST00000543916 TRAV21A0A0B4J279 112 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 LYRM9A8MSI8 78 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 MEF2BQ02080 365 aaPredicted RBP10.74□□□□□ -0.69
CD9-210ENST00000543916 CEMP1Q6PRD7 247 aaPredicted RBP10.74□□□□□ -0.69
CD9-210ENST00000543916 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 NOP10Q9NPE3 64 aaKnown RBP10.74□□□□□ -0.69
CD9-210ENST00000543916 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 C11orf21Q9P2W6 132 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
CD9-210ENST00000543916 NUPR2A6NF83 97 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 LTAP01374 205 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 ZNF680Q8NEM1 530 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 ZC2HC1AQ96GY0 325 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 DERL1Q9BUN8 251 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 VAX2Q9UIW0 290 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 ZFP30Q9Y2G7 519 aa10.73□□□□□ -0.69
CD9-210ENST00000543916 SNURFLB1AK76 121 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
CD9-210ENST00000543916 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 DAD1P61803 113 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 TDRG1Q3Y452 100 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
CD9-210ENST00000543916 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
CD9-210ENST00000543916 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
CD9-210ENST00000543916 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
CD9-210ENST00000543916 PDE6DO43924 150 aa10.71□□□□□ -0.69
CD9-210ENST00000543916 S100A9P06702 114 aaKnown RBP10.71□□□□□ -0.69
CD9-210ENST00000543916 RPL35P42766 123 aaKnown RBP10.71□□□□□ -0.69
CD9-210ENST00000543916 TCL1AP56279 114 aa10.71□□□□□ -0.69
CD9-210ENST00000543916 DAZ2Q13117 558 aaKnown RBP10.71□□□□□ -0.69
CD9-210ENST00000543916 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
CD9-210ENST00000543916 MDFICQ9P1T7 246 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms