RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 PRADC1Q9BSG0 188 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 IGHV1-69DA0A0B4J2H0 117 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 IGHV1-3A0A0C4DH29 117 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 CENPVL3A0A0U1RRI6 287 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 TMEM178BH3BS89 294 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 M0R381 172 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 FCN3O75636 299 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 CD7P09564 240 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 PRR30Q53SZ7 412 aaPredicted RBP3.88□□□□□ -1.79
LMO3-229ENST00000543721 OR10J6PQ8NGY7 276 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
LMO3-229ENST00000543721 MSRB1Q9NZV6 116 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 AGRNO00468 2067 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TRAV8-2A0A0B4J237 113 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 ARL3P36405 182 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 ZNF80P51504 273 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 ERCC8Q13216 396 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 SPANXN1Q5VSR9 72 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 Q71RC1 249 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 GLMPQ8WWB7 406 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 PSMG3-AS1Q96PY0 264 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 RAI1Q7Z5J4 1906 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 IGHV3-72A0A0B4J1Y9 119 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 H3BVH4 76 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 SLC25A20O43772 301 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TCL1BO95988 128 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 P0DMU3 169 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 FAM231AP0DMU4 169 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 FAM231CP0DMU5 169 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 PIP4P1Q86T03 277 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 CHD7Q9P2D1 2997 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 BUB1B-PAK6H3BSN5 160 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 LCE2BO14633 110 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 TNFRSF13BO14836 293 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 IGLV1-47P01700 117 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 LOXP28300 417 aaPredicted RBP3.87□□□□□ -1.79
LMO3-229ENST00000543721 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 VKORC1Q9BQB6 163 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
LMO3-229ENST00000543721 APELAP0DMC3 54 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 SUMO2P61956 95 aaKnown RBP3.86□□□□□ -1.79
LMO3-229ENST00000543721 CCL8P80075 99 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 ZFP2Q6ZN57 461 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 LENEPQ9Y5L5 61 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 TRAV8-4A0A0B4J246 113 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 PATE3B3GLJ2 98 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 NBR2O15453 112 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
LMO3-229ENST00000543721 RPL13AP40429 203 aaKnown RBP3.86□□□□□ -1.79
LMO3-229ENST00000543721 EFNA4P52798 201 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
LMO3-229ENST00000543721 FHL3Q13643 280 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 TMEM141Q96I45 108 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 NAV3Q8IVL0 2385 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 BRCA2P51587 3418 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 FAM186AA6NE01 2351 aa3.86□□□□□ -1.79
LMO3-229ENST00000543721 INTS1Q8N201 2190 aaKnown RBP3.86□□□□□ -1.79
LMO3-229ENST00000543721 A0A0J9YY99 117 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 MED14OSP0DP75 135 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 COX6B1P14854 86 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 GATA3P23771 443 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 CNTFRP26992 372 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 IGFL2Q6UWQ7 119 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 C2orf66Q6UXQ4 117 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 RNF152Q8N8N0 203 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 Q8TAT8 98 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 IGLV11-55A0A075B6I3 123 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 NHLRC4P0CG21 123 aaPredicted RBP3.85□□□□□ -1.79
LMO3-229ENST00000543721 HERV-K104P63124 156 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 TMEM105Q8N8V8 129 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 NPBQ8NG41 125 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 PTH2Q96A98 100 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 AJUBAQ96IF1 538 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 FAM90A27PA6NNH2 459 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 C9JAW5 83 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
LMO3-229ENST00000543721 MAFAQ8NHW3 353 aaPredicted RBP3.85□□□□□ -1.79
LMO3-229ENST00000543721 IGKV3D-20A0A0C4DH25 116 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 IGHV3-30P01768 117 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 CFC1P0CG37 223 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 IGHV3-30-5P0DP03 117 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 CFHR4Q92496 578 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 COL27A1Q8IZC6 1860 aaPredicted RBP3.84□□□□□ -1.79
LMO3-229ENST00000543721 CHD9Q3L8U1 2897 aa3.84□□□□□ -1.79
LMO3-229ENST00000543721 FAM240AA0A1B0GVK7 77 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms