RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 PAX4O43316 350 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 SSNA1O43805 119 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 PHYHIPLQ96FC7 376 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 PTTG2Q9NZH5 202 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 PRO0255Q9UI72 69 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 LENEPQ9Y5L5 61 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 RANP62826 216 aaKnown RBP9.06□□□□□ -0.96
RTN3-213ENST00000543552 ZNF266Q14584 549 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 FFAR4Q5NUL3 377 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 FAM74A1Q5RGS3 127 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 PRR9Q5T870 116 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 Q8TAT8 98 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 MARVELD1Q9BSK0 173 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 HSPB11Q9Y547 144 aa9.06□□□□□ -0.96
RTN3-213ENST00000543552 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 LRP1BQ9NZR2 4599 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 HSPG2P98160 4391 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 SIVA1O15304 175 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 MPC2O95563 127 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 H2BFSP57053 126 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 CMTM2Q8TAZ6 248 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
RTN3-213ENST00000543552 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
RTN3-213ENST00000543552 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 RPL12P30050 165 aaKnown RBP9.04□□□□□ -0.96
RTN3-213ENST00000543552 MRPL23Q16540 153 aaKnown RBP9.04□□□□□ -0.96
RTN3-213ENST00000543552 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 SPATA12Q7Z6I5 190 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 PCNPQ8WW12 178 aaKnown RBP9.04□□□□□ -0.96
RTN3-213ENST00000543552 SPXQ9BT56 116 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 OTORQ9NRC9 128 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 HHLA3Q9XRX5 114 aa9.04□□□□□ -0.96
RTN3-213ENST00000543552 TRGV4A0A0C4DH28 118 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 DIRC3C9JPN6 131 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 NXPH4O95158 308 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 CRYBA4P53673 196 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 ACOT6Q3I5F7 207 aaPredicted RBP9.03□□□□□ -0.96
RTN3-213ENST00000543552 Q6AWC8 147 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 ARL6IP6Q8N6S5 226 aa9.03□□□□□ -0.96
RTN3-213ENST00000543552 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 EREGO14944 169 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 LINC00315P59091 139 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 IFITM3Q01628 133 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 NEGR1Q7Z3B1 354 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 HYLS1Q96M11 299 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 SMIM3Q9BZL3 60 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 MBD2Q9UBB5 411 aa9.02□□□□□ -0.97
RTN3-213ENST00000543552 K7EP13 123 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 ORM1P02763 201 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 SRIP30626 198 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 FHL2Q14192 279 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 TMEM183BQ1AE95 376 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 TMEM183AQ8IXX5 376 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 MAPKAPK5-AS1Q8N8E1 139 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 OR10G4Q8NGN3 311 aa9.01□□□□□ -0.97
RTN3-213ENST00000543552 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
RTN3-213ENST00000543552 A6NHS1 94 aa9□□□□□ -0.97
RTN3-213ENST00000543552 C9JCJ5 164 aa9□□□□□ -0.97
RTN3-213ENST00000543552 TDRG1Q3Y452 100 aa9□□□□□ -0.97
RTN3-213ENST00000543552 Q6ZQT7 251 aa9□□□□□ -0.97
RTN3-213ENST00000543552 RASL10AQ92737 203 aa9□□□□□ -0.97
RTN3-213ENST00000543552 TXNDC17Q9BRA2 123 aa9□□□□□ -0.97
RTN3-213ENST00000543552 MDFICQ9P1T7 246 aa9□□□□□ -0.97
RTN3-213ENST00000543552 NAGKQ9UJ70 344 aa9□□□□□ -0.97
RTN3-213ENST00000543552 RPH3ALQ9UNE2 315 aa9□□□□□ -0.97
RTN3-213ENST00000543552 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 SERTM2A0A1B0GWG4 89 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 PGPA6NDG6 321 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 LYPD5Q6UWN5 251 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 GOLT1AQ6ZVE7 132 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 NDFIP1Q9BT67 221 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 BATF3Q9NR55 127 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 LY96Q9Y6Y9 160 aa8.99□□□□□ -0.97
RTN3-213ENST00000543552 TRAV4A0A0B4J268 109 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 K7EQM0 130 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 M0R2P5 195 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 OR10G9Q8NGN4 311 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 OR10G7Q8NGN6 311 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 TREM1Q9NP99 234 aa8.98□□□□□ -0.97
RTN3-213ENST00000543552 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
RTN3-213ENST00000543552 K7EQD1 137 aa8.97□□□□□ -0.97
RTN3-213ENST00000543552 SFTA3P0C7M3 94 aa8.97□□□□□ -0.97
RTN3-213ENST00000543552 GYPEP15421 78 aa8.97□□□□□ -0.97
RTN3-213ENST00000543552 EVI2AP22794 236 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms