RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CRX	O43186	299 aa	Predicted RBP	7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	NHLRC4	P0CG21	123 aa	Predicted RBP	7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	TAS2R60	P59551	318 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	SMUG1	Q53HV7	270 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545		Q86TA4	180 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	ZFAND2A	Q8N6M9	145 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	NHLRC2	Q8NBF2	726 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	TVP23C	Q96ET8	276 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	OVOL2	Q9BRP0	275 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	DERL1	Q9BUN8	251 aa		7.4	□□□□□ -1.22
CPSF7-221	ENST00000543545	AGRN	O00468	2067 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	TRBV6-1	A0A0K0K1D8	114 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	GCG	P01275	180 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	LTA	P01374	205 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	SRP19	P09132	144 aa	Known RBP	7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	GNG4	P50150	75 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	SRSF3	P84103	164 aa	Known RBP	7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	CENPW	Q5EE01	88 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	C1orf158	Q8N1D5	194 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	CSNK1G2-AS1	Q8NCQ2	148 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	TM2D3	Q9BRN9	247 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	NAGK	Q9UJ70	344 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	TP53TG1	Q9Y2A0	90 aa		7.39	□□□□□ -1.23
CPSF7-221	ENST00000543545	TRAV21	A0A0B4J279	112 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545		H7BYZ3	331 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	MGST1	P10620	155 aa	Known RBP	7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	MUC21	Q5SSG8	566 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	PRR9	Q5T870	116 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	TMEM183A	Q8IXX5	376 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	TMEM256	Q8N2U0	113 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	C20orf144	Q9BQM9	153 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	PARL	Q9H300	379 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	SMDT1	Q9H4I9	107 aa		7.38	□□□□□ -1.23
CPSF7-221	ENST00000543545	CBY3	A6NI87	242 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZNF727	A8MUV8	499 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545		C9JQL5	133 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	RBMY1A1	P0DJD3	496 aa	Known RBP	7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	RBMY1C	P0DJD4	496 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	RBMY1F	Q15415	496 aa	Known RBP	7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	RRN3P1	Q2M238	152 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	PRR27	Q6MZM9	219 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZNF705A	Q6ZN79	300 aa	Predicted RBP	7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545		Q6ZQT7	251 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	COMMD7	Q86VX2	200 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZC2HC1A	Q96GY0	325 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	SMIM7	Q9BQ49	75 aa		7.37	□□□□□ -1.23
CPSF7-221	ENST00000543545	IGHV1OR15-1	A0A075B7D0	117 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	SMIM9	A6NGZ8	99 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	FABP5P3	A8MUU1	101 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	NDUFS6	O75380	124 aa	Known RBP	7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZNF324	O75467	553 aa	Predicted RBP	7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	PRM2	P04554	102 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	PFN1	P07737	140 aa	Known RBP	7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	ZNF80	P51504	273 aa	Predicted RBP	7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	EMP1	P54849	157 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	SOHLH1	Q5JUK2	328 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	FAM162B	Q5T6X4	162 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545		Q6AWC8	147 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	FAM159A	Q6UWV7	190 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	DAZAP1	Q96EP5	407 aa	Known RBP	7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	PYGO2	Q9BRQ0	406 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545		X6R8D5	127 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	FBN3	Q75N90	2809 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	MEGF8	Q7Z7M0	2845 aa		7.36	□□□□□ -1.23
CPSF7-221	ENST00000543545	IGHV4-28	A0A0C4DH34	117 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	PGPEP1L	A6NFU8	196 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	DEFB4A	O15263	64 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	SH2D1A	O60880	128 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	ORM1	P02763	201 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	MIF	P14174	115 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	FAM74A3	Q4VXF1	159 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	EIF4E3	Q8N5X7	224 aa	Known RBP	7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	NEU1	Q99519	415 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	BIN3	Q9NQY0	253 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545		U3KQK5	164 aa		7.35	□□□□□ -1.23
CPSF7-221	ENST00000543545	TRBV20OR9-2	A0A075B6H5	130 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	LINC00862	A6NCI5	91 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545		C9JCJ5	164 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	SFTA3	P0C7M3	94 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	AZU1	P20160	251 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	CRIP1	P50238	77 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	OR5I1	Q13606	314 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	TMEM241	Q24JQ0	296 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	ANXA2R	Q3ZCQ2	193 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	UQCC3	Q6UW78	93 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	COX8C	Q7Z4L0	72 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	OCC1	Q8TAD7	63 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	KCNS1	Q96KK3	526 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	MLST8	Q9BVC4	326 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	SDF2L1	Q9HCN8	221 aa		7.34	□□□□□ -1.23
CPSF7-221	ENST00000543545	DNAH9	Q9NYC9	4486 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	TRGV11	A0A075B6L2	103 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	TMSB15B	A0A087X1C1	80 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545		A0A0J9YWU9	116 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545		M0R036	132 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	GNRH2	O43555	120 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	IGLV2-8	P01709	118 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	SMIM12	Q96EX1	92 aa		7.33	□□□□□ -1.24
CPSF7-221	ENST00000543545	C16orf74	Q96GX8	76 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms