RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 RPL24P83731 157 aaKnown RBP9.96□□□□□ -0.81
DDX11-223ENST00000542838 CEND1Q8N111 149 aa9.96□□□□□ -0.81
DDX11-223ENST00000542838 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.81
DDX11-223ENST00000542838 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.81
DDX11-223ENST00000542838 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.81
DDX11-223ENST00000542838 CLEC3BP05452 202 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 RAB9AP51151 201 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 ECSCRQ19T08 205 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 ZNF502Q8TBZ5 544 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 UFC1Q9Y3C8 167 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 GOSR1O95249 250 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 EBI3Q14213 229 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 LAGE3Q14657 143 aa9.96□□□□□ -0.82
DDX11-223ENST00000542838 K7EMI3 77 aa9.95□□□□□ -0.82
DDX11-223ENST00000542838 Q8N9W7 124 aa9.95□□□□□ -0.82
DDX11-223ENST00000542838 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
DDX11-223ENST00000542838 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
DDX11-223ENST00000542838 TMEM238C9JI98 176 aa9.95□□□□□ -0.82
DDX11-223ENST00000542838 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
DDX11-223ENST00000542838 MAPKAPK5-AS1Q8N8E1 139 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 FAM110DQ8TAY7 271 aaPredicted RBP9.94□□□□□ -0.82
DDX11-223ENST00000542838 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 RIF1Q5UIP0 2472 aaKnown RBP9.94□□□□□ -0.82
DDX11-223ENST00000542838 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 MINOS1Q5TGZ0 78 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 NRACQ8N912 160 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 MSRB2Q9Y3D2 182 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 MINOS1-NBL1R4GNA1 71 aa9.94□□□□□ -0.82
DDX11-223ENST00000542838 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 ANKHD1Q8IWZ3 2542 aaKnown RBP9.93□□□□□ -0.82
DDX11-223ENST00000542838 LRBAP50851 2863 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 A0A087WX48 190 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 CLPSL1A2RUU4 121 aa9.93□□□□□ -0.82
DDX11-223ENST00000542838 ZNF207O43670 478 aaKnown RBP9.93□□□□□ -0.82
DDX11-223ENST00000542838 DCHS2Q6V1P9 2916 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 TRAV8-2A0A0B4J237 113 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 ATP6V0E1O15342 81 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 EFNA4P52798 201 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 SRSF1Q07955 248 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■■■□ 20.8
DDX11-223ENST00000542838 Q6ZQT7 251 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 ZNF292O60281 2723 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 C1orf122Q6ZSJ8 110 aa9.92□□□□□ -0.82
DDX11-223ENST00000542838 IGLL5B9A064 214 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 AGRNO00468 2067 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 ZFP36P26651 326 aaKnown RBP9.91□□□□□ -0.82
DDX11-223ENST00000542838 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 E9PLD3 99 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 METTL26Q96S19 204 aa9.91□□□□□ -0.82
DDX11-223ENST00000542838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
DDX11-223ENST00000542838 H3BVH4 76 aa9.9□□□□□ -0.82
DDX11-223ENST00000542838 TAL2Q16559 108 aa9.9□□□□□ -0.82
DDX11-223ENST00000542838 FBXL19-AS1Q494R0 122 aa9.9□□□□□ -0.82
DDX11-223ENST00000542838 ZNF479Q96JC4 524 aa9.9□□□□□ -0.82
DDX11-223ENST00000542838 HIST1H4GQ99525 98 aa9.9□□□□□ -0.82
DDX11-223ENST00000542838 G3V318 75 aa9.9□□□□□ -0.83
DDX11-223ENST00000542838 PLNP26678 52 aa9.9□□□□□ -0.83
DDX11-223ENST00000542838 C12orf74Q32Q52 190 aa9.9□□□□□ -0.83
DDX11-223ENST00000542838 SPTBN2O15020 2390 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 CCL21O00585 134 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 FOXI2Q6ZQN5 318 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 C9orf47Q6ZRZ4 202 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 EEF1AKMT3Q96AZ1 226 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
DDX11-223ENST00000542838 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 KLK15Q9H2R5 256 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 HIF1ANQ9NWT6 349 aa9.89□□□□□ -0.83
DDX11-223ENST00000542838 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 H7C1H1 209 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 J3KRW8 73 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 CDSNQ15517 529 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 MED13LQ71F56 2210 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 WFDC2Q14508 124 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 MRAP2Q96G30 205 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 SIRPDQ9H106 197 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 CACNA1BQ00975 2339 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 ZFHX2Q9C0A1 2572 aaPredicted RBP9.88□□□□□ -0.83
DDX11-223ENST00000542838 F8VRH5 84 aa9.88□□□□□ -0.83
DDX11-223ENST00000542838 F8W1H4 67 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 PRR9Q5T870 116 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 TLN1Q9Y490 2541 aaKnown RBP9.87□□□□□ -0.83
DDX11-223ENST00000542838 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 H3BMG7 143 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
DDX11-223ENST00000542838 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
DDX11-223ENST00000542838 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms