RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FOXL1Q12952 345 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 C9orf139Q6ZV77 190 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 NIT1Q86X76 327 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 SYT8Q8NBV8 401 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 LYPD6BQ8NI32 183 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 PRR25Q96S07 402 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 JMJD8Q96S16 334 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 HIST1H2BLQ99880 126 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 RNF114Q9Y508 228 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 TEX15Q9BXT5 2789 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 IGHV4OR15-8A0A075B7B6 117 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 A0A087WW49 117 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 J3QLI3 93 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 SCGB1D4Q6XE38 83 aa7.87□□□□□ -1.15
TOP3A-208ENST00000542570 NDUFA3O95167 84 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 DEFB121Q5J5C9 76 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 ASH1LQ9NR48 2969 aaKnown RBP7.86□□□□□ -1.15
TOP3A-208ENST00000542570 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 F2Z2F3 143 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 IFITM10A6NMD0 228 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 DEFB130BP0DP73 79 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 DEFB130AP0DP74 79 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 SLAQ13239 276 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 OR10AG1Q8NH19 301 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 PRDM13Q9H4Q3 707 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 HSPB8Q9UJY1 196 aa7.86□□□□□ -1.15
TOP3A-208ENST00000542570 LINC01619G3V211 115 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 OVOL1O14753 267 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 TNFRSF13BO14836 293 aaPredicted RBP7.85□□□□□ -1.15
TOP3A-208ENST00000542570 GNRH2O43555 120 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 AMBPP02760 352 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 HINT1P49773 126 aaPredicted RBP7.85□□□□□ -1.15
TOP3A-208ENST00000542570 SPATA45Q537H7 98 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 V9GYV3 84 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 TRAV8-6A0A0B4J262 113 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 TMEM262E9PQX1 116 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 LY6LH3BQJ8 138 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 GP9P14770 177 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 BUB3O43684 328 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 ERASQ7Z444 233 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 ARL6IP6Q8N6S5 226 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 GSN-AS1Q9NRJ2 163 aa7.85□□□□□ -1.15
TOP3A-208ENST00000542570 UTP20O75691 2785 aaKnown RBP7.84□□□□□ -1.15
TOP3A-208ENST00000542570 NDUFA4O00483 81 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 LINC00614P0C842 121 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 LEPP41159 167 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 VAMP3Q15836 100 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 CCDC140Q96MF4 163 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 IGHV7-4-1A0A0J9YVY3 117 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 CITED2Q99967 270 aaPredicted RBP7.84□□□□□ -1.15
TOP3A-208ENST00000542570 SMPXQ9UHP9 88 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 A0A1B0GV90 55 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 PLA2G2AP14555 144 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 ANXA2RQ3ZCQ2 193 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 AMMECR1LQ6DCA0 310 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 HIST3H2BBQ8N257 126 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 PHLDA1Q8WV24 401 aaPredicted RBP7.84□□□□□ -1.15
TOP3A-208ENST00000542570 KIR2DL4Q99706 377 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 TMEM242Q9NWH2 141 aa7.84□□□□□ -1.15
TOP3A-208ENST00000542570 MRPL27Q9P0M9 148 aaKnown RBP7.84□□□□□ -1.15
TOP3A-208ENST00000542570 C5orf52A6NGY3 159 aa7.84□□□□□ -1.16
TOP3A-208ENST00000542570 ZNF25P17030 456 aaPredicted RBP7.84□□□□□ -1.16
TOP3A-208ENST00000542570 FOXC2Q99958 501 aa7.84□□□□□ -1.16
TOP3A-208ENST00000542570 TNFRSF18Q9Y5U5 241 aa7.84□□□□□ -1.16
TOP3A-208ENST00000542570 PRSS46E5RG02 174 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 CCL24O00175 119 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 IGHG2P01859 326 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 EGR2P11161 476 aaPredicted RBP7.83□□□□□ -1.16
TOP3A-208ENST00000542570 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 LOC102724200A0A096LPH7 203 aaPredicted RBP7.83□□□□□ -1.16
TOP3A-208ENST00000542570 A6NDX4 124 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 PRSS57Q6UWY2 283 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 DMRT1Q9Y5R6 373 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 TCF21O43680 179 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 CRYGCP07315 174 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
TOP3A-208ENST00000542570 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 ITPR2Q14571 2701 aa7.83□□□□□ -1.16
TOP3A-208ENST00000542570 IGHV3-64A0A075B6Q5 118 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 TRBV9A0A0B4J1U6 114 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
TOP3A-208ENST00000542570 PYY3Q5JQD4 70 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 LYPD1Q8N2G4 141 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 RCHY1Q96PM5 261 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 IGF1P05019 195 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 PDE6HQ13956 83 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 TMEM70Q9BUB7 260 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 MS4A6AQ9H2W1 248 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
TOP3A-208ENST00000542570 ZNF324O75467 553 aaPredicted RBP7.82□□□□□ -1.16
TOP3A-208ENST00000542570 DUSP14O95147 198 aaKnown RBP7.82□□□□□ -1.16
TOP3A-208ENST00000542570 PRSS2P07478 247 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 LOXL1Q08397 574 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms