RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 IBA57Q5T440 356 aaKnown RBP10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 OR5C1Q8NGR4 320 aa10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.7
SCNN1A-217ENST00000542260 BORCS7-ASMTA0A0B4J1R7 106 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 ZNF324O75467 553 aaPredicted RBP10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 CRISP2P16562 243 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 TCL1AP56279 114 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 EIF5AP63241 154 aaKnown RBP10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 Q8N1X5 172 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 BLNKQ8WV28 456 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 ZNF471Q9BX82 626 aaPredicted RBP10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 NPCDR1Q9BY65 106 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
SCNN1A-217ENST00000542260 RGS13O14921 159 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 SIVA1O15304 175 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 NDUFB4O95168 129 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 IFNA5P01569 189 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 PYYP10082 97 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 ZNF266Q14584 549 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 SLC51BQ86UW2 128 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 ATP5SQ99766 215 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 AGPAT4-IT1Q9H0P7 198 aa10.63□□□□□ -0.71
SCNN1A-217ENST00000542260 PAX4O43316 350 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 SPINK4O60575 86 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 LINC00315P59091 139 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 SLAQ13239 276 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 ICAM4Q14773 271 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 KCNIP2Q9NS61 270 aa10.62□□□□□ -0.71
SCNN1A-217ENST00000542260 EREGO14944 169 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 TPT1P13693 172 aaKnown RBP10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 FAM122CQ6P4D5 195 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 SCGB1C1Q8TD33 95 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 SLC25A2Q9BXI2 301 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 PRO0255Q9UI72 69 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
SCNN1A-217ENST00000542260 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 NBEAP1P0C6P0 100 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 KRTAP10-2P60368 255 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 RPL7L1Q6DKI1 246 aaKnown RBP10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 VGLL1Q99990 258 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 MRPL32Q9BYC8 188 aaKnown RBP10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 WFDC1Q9HC57 220 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 CYTL1Q9NRR1 136 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 ZNF492Q9P255 531 aa10.6□□□□□ -0.71
SCNN1A-217ENST00000542260 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 NXPH4O95158 308 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 OR51M1Q9H341 326 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 DNAH5Q8TE73 4624 aa10.59□□□□□ -0.71
SCNN1A-217ENST00000542260 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 CSN1S1P47710 185 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 ZNF138P52744 262 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 EIF5AL1Q6IS14 154 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 NFE4Q86UQ8 179 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 FAM167A-AS1Q96KT0 104 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 MRPL16Q9NX20 251 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 TP53TG3Q9ULZ0 132 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 HHLA3Q9XRX5 114 aa10.58□□□□□ -0.72
SCNN1A-217ENST00000542260 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 CRYBA4P53673 196 aa10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 PRR9Q5T870 116 aa10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 Q6ZRN7 208 aaPredicted RBP10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 HSD17B11Q8NBQ5 300 aa10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
SCNN1A-217ENST00000542260 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 OR7C2O60412 319 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 OR10J4P0C629 311 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 CDPF1Q6NVV7 123 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 FXYD5Q96DB9 178 aa10.56□□□□□ -0.72
SCNN1A-217ENST00000542260 K7EP13 123 aa10.55□□□□□ -0.72
SCNN1A-217ENST00000542260 IFNA7P01567 189 aa10.55□□□□□ -0.72
SCNN1A-217ENST00000542260 Q8TAT8 98 aa10.55□□□□□ -0.72
SCNN1A-217ENST00000542260 PHYHIPLQ96FC7 376 aa10.55□□□□□ -0.72
SCNN1A-217ENST00000542260 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
SCNN1A-217ENST00000542260 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 353.6 ms