RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 TREM1Q9NP99 234 aa15.27■□□□□ 0.04
MSRB3-211ENST00000541897 GOLT1BQ9Y3E0 138 aa15.27■□□□□ 0.04
MSRB3-211ENST00000541897 TRAV12-2A0A075B6T6 113 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 TRAV34A0A0B4J273 112 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 TAS2R60P59551 318 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 PRNTQ86SH4 94 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 Q86TA4 180 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 SGK494Q96LW2 274 aa15.26■□□□□ 0.03
MSRB3-211ENST00000541897 C7orf71A4D174 169 aa15.25■□□□□ 0.03
MSRB3-211ENST00000541897 LTAP01374 205 aa15.25■□□□□ 0.03
MSRB3-211ENST00000541897 C1orf158Q8N1D5 194 aa15.25■□□□□ 0.03
MSRB3-211ENST00000541897 NEU1Q99519 415 aa15.25■□□□□ 0.03
MSRB3-211ENST00000541897 RPL35P42766 123 aaKnown RBP15.24■□□□□ 0.03
MSRB3-211ENST00000541897 KIR3DS1Q14943 382 aa15.24■□□□□ 0.03
MSRB3-211ENST00000541897 Q6AWC8 147 aa15.24■□□□□ 0.03
MSRB3-211ENST00000541897 MED9Q9NWA0 146 aa15.24■□□□□ 0.03
MSRB3-211ENST00000541897 ZNF324O75467 553 aaPredicted RBP15.23■□□□□ 0.03
MSRB3-211ENST00000541897 PEA15Q15121 130 aa15.23■□□□□ 0.03
MSRB3-211ENST00000541897 SMIM12Q96EX1 92 aa15.23■□□□□ 0.03
MSRB3-211ENST00000541897 NIPSNAP3BQ9BS92 247 aa15.23■□□□□ 0.03
MSRB3-211ENST00000541897 RAB19A4D1S5 217 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 SMIM9A6NGZ8 99 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 H7BYZ3 331 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 RBMY1A1P0DJD3 496 aaKnown RBP15.22■□□□□ 0.03
MSRB3-211ENST00000541897 RBMY1CP0DJD4 496 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 RNASE4P34096 147 aaKnown RBP15.22■□□□□ 0.03
MSRB3-211ENST00000541897 BTN1A1Q13410 526 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 RBMY1FQ15415 496 aaKnown RBP15.22■□□□□ 0.03
MSRB3-211ENST00000541897 SMUG1Q53HV7 270 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 PRR9Q5T870 116 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 TMEM183AQ8IXX5 376 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 OR11H2Q8NH07 326 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 STAB2Q8WWQ8 2551 aa15.22■□□□□ 0.03
MSRB3-211ENST00000541897 TRAV12-3A0A0B4J271 114 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 J3KRW8 73 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 LINC00467Q9BRT7 94 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 TMEM208Q9BTX3 173 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 DERL1Q9BUN8 251 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 MLST8Q9BVC4 326 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 RETNQ9HD89 108 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 X6R8D5 127 aa15.21■□□□□ 0.03
MSRB3-211ENST00000541897 SRP19P09132 144 aaKnown RBP15.2■□□□□ 0.02
MSRB3-211ENST00000541897 MIFP14174 115 aa15.2■□□□□ 0.02
MSRB3-211ENST00000541897 BAGE2Q86Y30 109 aa15.2■□□□□ 0.02
MSRB3-211ENST00000541897 C8orf49Q96NF6 230 aa15.2■□□□□ 0.02
MSRB3-211ENST00000541897 PYGO2Q9BRQ0 406 aa15.2■□□□□ 0.02
MSRB3-211ENST00000541897 U3KQK5 164 aa15.2■□□□□ 0.02
MSRB3-211ENST00000541897 TRAV21A0A0B4J279 112 aa15.19■□□□□ 0.02
MSRB3-211ENST00000541897 LINC01587Q99440 93 aa15.19■□□□□ 0.02
MSRB3-211ENST00000541897 PARLQ9H300 379 aa15.19■□□□□ 0.02
MSRB3-211ENST00000541897 C9JCJ5 164 aa15.18■□□□□ 0.02
MSRB3-211ENST00000541897 GCGP01275 180 aa15.18■□□□□ 0.02
MSRB3-211ENST00000541897 PFN1P07737 140 aaKnown RBP15.18■□□□□ 0.02
MSRB3-211ENST00000541897 GNG4P50150 75 aa15.17■□□□□ 0.02
MSRB3-211ENST00000541897 SRSF3P84103 164 aaKnown RBP15.17■□□□□ 0.02
MSRB3-211ENST00000541897 CENPWQ5EE01 88 aa15.17■□□□□ 0.02
MSRB3-211ENST00000541897 ZC2HC1AQ96GY0 325 aa15.17■□□□□ 0.02
MSRB3-211ENST00000541897 TRBV20OR9-2A0A075B6H5 130 aa15.16■□□□□ 0.02
MSRB3-211ENST00000541897 IGHV3OR16-12A0A075B7B8 117 aa15.16■□□□□ 0.02
MSRB3-211ENST00000541897 ZNF80P51504 273 aaPredicted RBP15.16■□□□□ 0.02
MSRB3-211ENST00000541897 RRN3P1Q2M238 152 aa15.16■□□□□ 0.02
MSRB3-211ENST00000541897 Q8NAQ8 132 aa15.16■□□□□ 0.02
MSRB3-211ENST00000541897 HUWE1Q7Z6Z7 4374 aaKnown RBP15.16■□□□□ 0.02
MSRB3-211ENST00000541897 IGHV1OR15-1A0A075B7D0 117 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 FABP5P3A8MUU1 101 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 IGLV2-8P01709 118 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 ZNF674Q2M3X9 581 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 TDRG1Q3Y452 100 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 ANXA2RQ3ZCQ2 193 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 C11orf68Q9H3H3 251 aaKnown RBP15.15■□□□□ 0.02
MSRB3-211ENST00000541897 LY96Q9Y6Y9 160 aa15.15■□□□□ 0.02
MSRB3-211ENST00000541897 TMEM189A5PLL7 270 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 LINC00862A6NCI5 91 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 C9JQL5 133 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 FAM74A3Q4VXF1 159 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 FAM162BQ5T6X4 162 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 UQCC3Q6UW78 93 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 ZNF493Q6ZR52 646 aa15.14■□□□□ 0.01
MSRB3-211ENST00000541897 EIF4E3Q8N5X7 224 aaKnown RBP15.14■□□□□ 0.01
MSRB3-211ENST00000541897 CRIP1P50238 77 aa15.13■□□□□ 0.01
MSRB3-211ENST00000541897 Q6ZQT7 251 aa15.13■□□□□ 0.01
MSRB3-211ENST00000541897 KCNS1Q96KK3 526 aa15.13■□□□□ 0.01
MSRB3-211ENST00000541897 SMIM7Q9BQ49 75 aa15.13■□□□□ 0.01
MSRB3-211ENST00000541897 BIN3Q9NQY0 253 aa15.13■□□□□ 0.01
MSRB3-211ENST00000541897 IGHV4-28A0A0C4DH34 117 aa15.12■□□□□ 0.01
MSRB3-211ENST00000541897 FAM159AQ6UWV7 190 aa15.12■□□□□ 0.01
MSRB3-211ENST00000541897 NHLRC2Q8NBF2 726 aa15.12■□□□□ 0.01
MSRB3-211ENST00000541897 RNASE8Q8TDE3 154 aaKnown RBP15.12■□□□□ 0.01
MSRB3-211ENST00000541897 TMEM263Q8WUH6 116 aaKnown RBP15.12■□□□□ 0.01
MSRB3-211ENST00000541897 C16orf74Q96GX8 76 aa15.12■□□□□ 0.01
MSRB3-211ENST00000541897 ZNF705GA8MUZ8 300 aaPredicted RBP15.11■□□□□ 0.01
MSRB3-211ENST00000541897 CEBPGP53567 150 aa15.11■□□□□ 0.01
MSRB3-211ENST00000541897 ZNF727A8MUV8 499 aa15.1■□□□□ 0.01
MSRB3-211ENST00000541897 SH2D1AO60880 128 aa15.1■□□□□ 0.01
MSRB3-211ENST00000541897 IBA57Q5T440 356 aaKnown RBP15.1■□□□□ 0.01
MSRB3-211ENST00000541897 CBY3A6NI87 242 aa15.09■□□□□ 0.01
MSRB3-211ENST00000541897 AZU1P20160 251 aa15.09■□□□□ 0.01
MSRB3-211ENST00000541897 SOHLH1Q5JUK2 328 aa15.09■□□□□ 0.01
MSRB3-211ENST00000541897 OCC1Q8TAD7 63 aa15.09■□□□□ 0.01
MSRB3-211ENST00000541897 SDF2L1Q9HCN8 221 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms