RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 OSR2Q8N2R0 312 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 TCTEX1D1Q8N7M0 179 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 LSM10Q969L4 123 aaKnown RBP3.27□□□□□ -1.89
CIT-211ENST00000541841 LINC00477Q96M19 166 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 LINC00167Q96N53 147 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 CIB3Q96Q77 187 aaPredicted RBP3.27□□□□□ -1.89
CIT-211ENST00000541841 RNF5Q99942 180 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 SHANK2-AS3Q9BTD1 123 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 FAM60AQ9NP50 221 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 ZFP30Q9Y2G7 519 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 TRAPPC1Q9Y5R8 145 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 FLNBO75369 2602 aaKnown RBP3.27□□□□□ -1.89
CIT-211ENST00000541841 GOLGA4Q13439 2230 aaKnown RBP3.27□□□□□ -1.89
CIT-211ENST00000541841 PTPRSQ13332 1948 aa3.27□□□□□ -1.89
CIT-211ENST00000541841 SPTBP11277 2137 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 IGKV1-12A0A0C4DH73 117 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 M0R135 149 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 M0R381 172 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 DEGS1O15121 323 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 SYNGR2O43760 224 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 OR7C2O60412 319 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 IGKV1D-12P01611 117 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 IGKV3-11P04433 115 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 PFN1P07737 140 aaKnown RBP3.26□□□□□ -1.89
CIT-211ENST00000541841 OR5G3P0C626 314 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 KLF3P57682 345 aaPredicted RBP3.26□□□□□ -1.89
CIT-211ENST00000541841 RPS20P60866 119 aaKnown RBP3.26□□□□□ -1.89
CIT-211ENST00000541841 PMCHL1Q16048 86 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 FAM201AQ5SY85 155 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 C6orf201Q7Z4U5 140 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 TMEM144Q7Z5S9 345 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 C20orf196Q8IYI0 205 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 SAXO1Q8IYX7 474 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 C1orf158Q8N1D5 194 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 SIGLECL1Q8N7X8 197 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 OR8A1Q8NGG7 326 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 MRPL30Q8TCC3 161 aaKnown RBP3.26□□□□□ -1.89
CIT-211ENST00000541841 TMEM147Q9BVK8 224 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 SNHG12Q9BXW3 62 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 CBLN4Q9NTU7 201 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 PSENENQ9NZ42 101 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 UQCR10Q9UDW1 63 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 MCTS1Q9ULC4 181 aaKnown RBP3.26□□□□□ -1.89
CIT-211ENST00000541841 FUT9Q9Y231 359 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 LHFPL6Q9Y693 200 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 ZZEF1O43149 2961 aa3.26□□□□□ -1.89
CIT-211ENST00000541841 ASPMQ8IZT6 3477 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 CNOT1A5YKK6 2376 aaKnown RBP3.25□□□□□ -1.89
CIT-211ENST00000541841 SETXQ7Z333 2677 aaKnown RBP3.25□□□□□ -1.89
CIT-211ENST00000541841 IGLV4-69A0A075B6H9 119 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 IGHV3-43A0A0B4J1X8 118 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 CST7O76096 145 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 IGLV3-1P01715 115 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 GYPAP02724 150 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 CGB3P0DN86 165 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 CGB7P0DN87 165 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 GABRA2P47869 451 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 RBM11P57052 281 aaKnown RBP3.25□□□□□ -1.89
CIT-211ENST00000541841 SLC38A11Q08AI6 406 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 CATR1Q13166 79 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 BATFQ16520 125 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 DEFB110Q30KQ9 67 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 PLPPR5Q32ZL2 321 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 NMSQ5H8A3 153 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 C10orf128Q5T292 105 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 FAM104BQ5XKR9 115 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 LCN15Q6UWW0 184 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 ZFP2Q6ZN57 461 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 BAGE3Q86Y29 109 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 BAGE2Q86Y30 109 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 DEFB125Q8N687 156 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 ZNF721Q8TF20 911 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 BORCS7Q96B45 105 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 OR2J1Q9GZK6 312 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 C11orf1Q9H5F2 150 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 TMEM106BQ9NUM4 274 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 MED29Q9NX70 200 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 BET1LQ9NYM9 111 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 RBM7Q9Y580 266 aaKnown RBP3.25□□□□□ -1.89
CIT-211ENST00000541841 PXMP4Q9Y6I8 212 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 LY96Q9Y6Y9 160 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 THADAQ6YHU6 1953 aa3.25□□□□□ -1.89
CIT-211ENST00000541841 NACAE9PAV3 2078 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 EXPH5Q8NEV8 1989 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 IGKV3D-11A0A0A0MRZ8 115 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 A0A1B0GX78 115 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 TRAPPC2LH3BP13 241 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 K7ERU9 68 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 OR2J2O76002 312 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 OR7C1O76099 320 aaPredicted RBP3.24□□□□□ -1.89
CIT-211ENST00000541841 IGHV1-46P01743 117 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 TRGV3P03979 118 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 CLPSP04118 112 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 FGF6P10767 208 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 BRS3P32247 399 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 OPRM1P35372 400 aa3.24□□□□□ -1.89
CIT-211ENST00000541841 CCL20P78556 96 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms