RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 ZNF492Q9P255 531 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 TRGV11A0A075B6L2 103 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 IGKV2-40A0A087WW87 121 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-216ENST00000541416 UBE2L5PA0A1B0GUS4 154 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 NDUFB4O95168 129 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 IGKV2D-40P01614 121 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-216ENST00000541416 CSN1S1P47710 185 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 PPT1P50897 306 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 FAM159AQ6UWV7 190 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 STX12Q86Y82 276 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 Q8N814 137 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 MITD1Q8WV92 249 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 RASL10AQ92737 203 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 FLVCR2Q9UPI3 526 aa8.25□□□□□ -1.09
SNHG1-216ENST00000541416 LSM5Q9Y4Y9 91 aaKnown RBP8.25□□□□□ -1.09
SNHG1-216ENST00000541416 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 SFTA3P0C7M3 94 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 TIRAPP58753 221 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 ATP6V1FQ16864 119 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 VWC2Q2TAL6 325 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 NHLRC2Q8NBF2 726 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 CHAC2Q8WUX2 184 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 ZNF479Q96JC4 524 aa8.24□□□□□ -1.09
SNHG1-216ENST00000541416 DNAH8Q96JB1 4490 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-216ENST00000541416 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 IBA57-AS1B1ANH7 110 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 PYYP10082 97 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 FGF7P21781 194 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 SULT1A1P50225 295 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 MUC21Q5SSG8 566 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 PRR9Q5T870 116 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 OR4C5Q8NGB2 326 aa8.23□□□□□ -1.09
SNHG1-216ENST00000541416 C5orf51A6NDU8 294 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 PFN1P07737 140 aaKnown RBP8.22□□□□□ -1.09
SNHG1-216ENST00000541416 NBEAP1P0C6P0 100 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 ZNF266Q14584 549 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 TMEM183BQ1AE95 376 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 TDRG1Q3Y452 100 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 TMEM183AQ8IXX5 376 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 TM2D2Q9BX73 214 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 Q9HAA7 133 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 LENEPQ9Y5L5 61 aa8.22□□□□□ -1.09
SNHG1-216ENST00000541416 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 FAM24AA6NFZ4 105 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 CCDC160A6NGH7 325 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 M0R2P5 195 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 OR10J3Q5JRS4 329 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 Q8TAT8 98 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 ATP5SQ99766 215 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 SH3BGRL3Q9H299 93 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
SNHG1-216ENST00000541416 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-216ENST00000541416 CCSO14618 274 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 S100A10P60903 97 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 LAGE3Q14657 143 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 BAK1Q16611 211 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 Q6AWC8 147 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 PAXXQ9BUH6 204 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 SLC25A2Q9BXI2 301 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
SNHG1-216ENST00000541416 CIDEAO60543 219 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 Q6ZQT7 251 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 TMEM252Q8N6L7 170 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 NAGKQ9UJ70 344 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 HMCN2Q8NDA2 5059 aa8.19□□□□□ -1.1
SNHG1-216ENST00000541416 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
SNHG1-216ENST00000541416 MIR17HGQ75NE6 70 aa8.18□□□□□ -1.1
SNHG1-216ENST00000541416 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
SNHG1-216ENST00000541416 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
SNHG1-216ENST00000541416 IGSF23A1L1A6 192 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 OR7C2O60412 319 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 IGHV3-30P01768 117 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 OR10J4P0C629 311 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 IGHV3-30-3P0DP02 117 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 IGHV3-30-5P0DP03 117 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 GATA1P15976 413 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-216ENST00000541416 RANP62826 216 aaKnown RBP8.17□□□□□ -1.1
SNHG1-216ENST00000541416 RHOHQ15669 191 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 LELP1Q5T871 98 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 Q6ZSA8 131 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 TMED6Q8WW62 240 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms