RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 LCN15Q6UWW0 184 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 LGI3Q8N145 548 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 ARRDC1Q8N5I2 433 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 OR10G4Q8NGN3 311 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 OR1S1Q8NH92 325 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 DPH3Q96FX2 82 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 C2orf50Q96LR7 162 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 MRPL16Q9NX20 251 aaKnown RBP6.08□□□□□ -1.44
YBX3-211ENST00000541351 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
YBX3-211ENST00000541351 IGKV2D-24A0A075B6R9 120 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 IGKV1D-37A0A075B6S9 117 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 C3orf85A0A1B0GTC6 90 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 C7orf71A4D174 169 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 RAB19A4D1S5 217 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 APOC3P02656 99 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 MRPS10P82664 201 aaKnown RBP6.07□□□□□ -1.44
YBX3-211ENST00000541351 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 TMUB2Q71RG4 321 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 SVBPQ8N300 66 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 C12orf45Q8N5I9 185 aaPredicted RBP6.07□□□□□ -1.44
YBX3-211ENST00000541351 CCDC71LQ8N9Z2 235 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 IL22RA2Q969J5 263 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 RNF185Q96GF1 192 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 OR51M1Q9H341 326 aa6.07□□□□□ -1.44
YBX3-211ENST00000541351 MEIS3P1A6NDR6 274 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 PVALBP20472 110 aaPredicted RBP6.06□□□□□ -1.44
YBX3-211ENST00000541351 PIGPP57054 158 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 RAB11AP62491 216 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 VWC2Q2TAL6 325 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 DGAT2L7PQ6IED9 249 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 C15orf40Q8WUR7 153 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 SFT2D1Q8WV19 159 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 PHYHIPLQ96FC7 376 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 C20orf85Q9H1P6 137 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 MGAT4CQ9UBM8 478 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 VAX2Q9UIW0 290 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 HIGD1AQ9Y241 93 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 URGCP-MRPS24S4R325 110 aa6.06□□□□□ -1.44
YBX3-211ENST00000541351 FAM74A7A6NL05 159 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 LINC00587B1AMM8 73 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 H3BRN7 92 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 ANXA7P20073 488 aaKnown RBP6.05□□□□□ -1.44
YBX3-211ENST00000541351 FAM74A3Q4VXF1 159 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 TEPPQ6URK8 271 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 STX12Q86Y82 276 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 SAMD12Q8N8I0 201 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 OR10G9Q8NGN4 311 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 TMEM170AQ8WVE7 144 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 SMIM4Q8WVI0 70 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 ZNF479Q96JC4 524 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 TP53RKQ96S44 253 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 PRADC1Q9BSG0 188 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 SHANK2-AS3Q9BTD1 123 aa6.05□□□□□ -1.44
YBX3-211ENST00000541351 PARD6GQ9BYG4 376 aaPredicted RBP6.05□□□□□ -1.44
YBX3-211ENST00000541351 IGKV1OR2-108A0A075B7D4 117 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 TRAV4A0A0B4J268 109 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 OR10J4P0C629 311 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 SFTA3P0C7M3 94 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 RAB5BP61020 215 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 RAB31Q13636 194 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 ELOBQ15370 118 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 C10orf91Q5T1B1 145 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 ATRAIDQ6UW56 229 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 OR4C5Q8NGB2 326 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 SPXQ9BT56 116 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 GTSF1LQ9H1H1 148 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 ZNF331Q9NQX6 463 aaPredicted RBP6.04□□□□□ -1.44
YBX3-211ENST00000541351 ANAPC10Q9UM13 185 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 CARHSP1Q9Y2V2 147 aaKnown RBP6.04□□□□□ -1.44
YBX3-211ENST00000541351 PXMP4Q9Y6I8 212 aa6.04□□□□□ -1.44
YBX3-211ENST00000541351 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 FAM231BA6NCW3 169 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 DISC1C4P0D8 188 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 RPL19P84098 196 aaKnown RBP6.03□□□□□ -1.44
YBX3-211ENST00000541351 GUK1Q16774 197 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 C4orf46Q504U0 113 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 KCNIP4Q6PIL6 250 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 ALKAL2Q6UX46 152 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 OR10P1Q8NGE3 313 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 DTD1Q8TEA8 209 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 RASL10AQ92737 203 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 S100A16Q96FQ6 103 aaKnown RBP6.03□□□□□ -1.44
YBX3-211ENST00000541351 ARL6Q9H0F7 186 aa6.03□□□□□ -1.44
YBX3-211ENST00000541351 IGHV1OR15-1A0A075B7D0 117 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 A0A0G2JRQ6 117 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 TMEM218A2RU14 115 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 SMIM30A4D0T7 59 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 HYPMO75409 117 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 EIF3GO75821 320 aaKnown RBP eCLIP6.02□□□□□ -1.45
YBX3-211ENST00000541351 GPX1P07203 203 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 CT45A10P0DMU9 189 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 PRSS3P35030 304 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 FAUP35544 74 aaKnown RBP6.02□□□□□ -1.45
YBX3-211ENST00000541351 CCR6P51684 374 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 RPP30P78346 268 aaKnown RBP6.02□□□□□ -1.45
YBX3-211ENST00000541351 Q0VG73 95 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms