RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SMKR1H3BMG3 65 aa13.23□□□□□ -0.29
SPIDR-227ENST00000541342 RPS20P60866 119 aaKnown RBP13.23□□□□□ -0.29
SPIDR-227ENST00000541342 ORMDL3Q8N138 153 aa13.23□□□□□ -0.29
SPIDR-227ENST00000541342 Q8TAT8 98 aa13.23□□□□□ -0.29
SPIDR-227ENST00000541342 THYN1Q9P016 225 aa13.23□□□□□ -0.29
SPIDR-227ENST00000541342 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
SPIDR-227ENST00000541342 TCTAP57738 103 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 DPF1Q92782 380 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 PRR25Q96S07 402 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 CR1P17927 2039 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 C7orf71A4D174 169 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 CACNG7P62955 275 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 SMAD5-AS1Q9Y6J3 95 aa13.22□□□□□ -0.29
SPIDR-227ENST00000541342 NPYP01303 97 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 KLK9Q2XQG4 91 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 LGALS9BQ3B8N2 356 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 TMEM97Q5BJF2 176 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 LGALS9CQ6DKI2 356 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 VGLL1Q99990 258 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 KLK9Q9UKQ9 250 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 LY6EQ16553 131 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
SPIDR-227ENST00000541342 H3BUX3 64 aa13.21□□□□□ -0.3
SPIDR-227ENST00000541342 GATA3P23771 443 aa13.21□□□□□ -0.3
SPIDR-227ENST00000541342 HLA-DMBP28068 263 aa13.21□□□□□ -0.3
SPIDR-227ENST00000541342 OCIAD2Q56VL3 154 aa13.21□□□□□ -0.3
SPIDR-227ENST00000541342 BOD1L2Q8IYS8 172 aa13.21□□□□□ -0.3
SPIDR-227ENST00000541342 RNF223E7ERA6 249 aa13.2□□□□□ -0.3
SPIDR-227ENST00000541342 GAS8-AS1O95177 125 aa13.2□□□□□ -0.3
SPIDR-227ENST00000541342 CTSGP08311 255 aa13.2□□□□□ -0.3
SPIDR-227ENST00000541342 DEFB113Q30KQ7 82 aa13.2□□□□□ -0.3
SPIDR-227ENST00000541342 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
SPIDR-227ENST00000541342 PPBPP02775 128 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 HBDP02042 147 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
SPIDR-227ENST00000541342 LINC00527Q9UJ94 153 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 A6NDX4 124 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 SEC11AP67812 179 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 CSPG4Q6UVK1 2322 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
SPIDR-227ENST00000541342 ZNF502Q8TBZ5 544 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-227ENST00000541342 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 RNF185Q96GF1 192 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 TWIST1Q15672 202 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 ADAMTSL5Q6ZMM2 481 aa13.18□□□□□ -0.3
SPIDR-227ENST00000541342 TGFAP01135 160 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 IGHV3OR16-8A0A075B7F1 116 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 CKS2P33552 79 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 WFDC3Q8IUB2 231 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 PCP2Q8IVA1 136 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
SPIDR-227ENST00000541342 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
SPIDR-227ENST00000541342 Q5PR19 223 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 DKK2Q9UBU2 259 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 HIST2H2BCQ6DN03 193 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 UFSP1Q6NVU6 142 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 PLA2G2AP14555 144 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
SPIDR-227ENST00000541342 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-227ENST00000541342 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
SPIDR-227ENST00000541342 IGHV4-31P0DP07 118 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 Q6ZS46 218 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 LRRC75A-AS1Q8N1F1 130 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
SPIDR-227ENST00000541342 BLCAPP62952 87 aa13.15□□□□□ -0.31
SPIDR-227ENST00000541342 CNFNQ9BYD5 112 aa13.15□□□□□ -0.31
SPIDR-227ENST00000541342 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.31
SPIDR-227ENST00000541342 CLEC3BP05452 202 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 ARL6IP6Q8N6S5 226 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 LINC01546A6NGU7 62 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 J3QLI3 93 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 NAA38Q9BRA0 125 aaKnown RBP13.14□□□□□ -0.31
SPIDR-227ENST00000541342 NPFFR1Q9GZQ6 430 aa13.14□□□□□ -0.31
SPIDR-227ENST00000541342 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 C9orf118A6NHY6 69 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 IGHG2P01859 326 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 IGF1P05019 195 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 ERCC8Q13216 396 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 H3BRM9 83 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 CLEC19AQ6UXS0 136 aa13.13□□□□□ -0.31
SPIDR-227ENST00000541342 C18orf15Q96N68 181 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms