RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 H3BRM9 83 aa11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 MYCNOSP40205 109 aa11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 ARPC1AQ92747 370 aa11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 ANK3Q12955 4377 aaKnown RBP11.21□□□□□ -0.62
SFSWAP-210ENST00000541286 NCBP2LA6PVI3 153 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 BUB1B-PAK6H3BSN5 160 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 FCER1GP30273 86 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 FXYD2P54710 66 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 SEC11AP67812 179 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 HSD52Q0P140 79 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 BRD3OSQ6XYD6 125 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 Q86TA4 180 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 LINC01545Q5VT33 79 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 H3BMG7 143 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 FGF6P10767 208 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
SFSWAP-210ENST00000541286 DLX6P56179 175 aa11.19□□□□□ -0.62
SFSWAP-210ENST00000541286 RASL11AQ6T310 242 aa11.19□□□□□ -0.62
SFSWAP-210ENST00000541286 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
SFSWAP-210ENST00000541286 AGRNO00468 2067 aa11.19□□□□□ -0.62
SFSWAP-210ENST00000541286 A6NJY4 79 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 GAGE12HA6NDE8 117 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 CKS1BP61024 79 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 D6R8Y8 96 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 CRYGCP07315 174 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 C8orf49Q96NF6 230 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
SFSWAP-210ENST00000541286 TMEM213A2RRL7 107 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 ATRQ13535 2644 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 IGHV3OR16-13A0A075B7E8 117 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 IGHV3-74A0A0B4J1X5 117 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 TGFAP01135 160 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 CT45A10P0DMU9 189 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 CSN1S1P47710 185 aa11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
SFSWAP-210ENST00000541286 IGKV2D-26A0A0A0MRZ7 120 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 AMN1Q8IY45 258 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 PSG8Q9UQ74 426 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 NDUFS8O00217 210 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 HIF1ANQ9NWT6 349 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 K7EQM0 130 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 CRYBA4P53673 196 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 VMO1Q7Z5L0 202 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 DYNAPQ8N1N2 210 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 Q8TAT8 98 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 RNF125Q96EQ8 232 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 ATP6V0BQ99437 205 aa11.16□□□□□ -0.62
SFSWAP-210ENST00000541286 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 A0A096LNJ9 63 aa11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 A0A096LNT2 108 aa11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 GTSCR1Q86UQ5 136 aa11.15□□□□□ -0.62
SFSWAP-210ENST00000541286 I3L2K1 104 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 NDFIP1Q9BT67 221 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 DUX5Q96PT3 197 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 A0A1B0GV72 72 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 RIGQ13278 110 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 ZNF414Q96IQ9 312 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
SFSWAP-210ENST00000541286 K7EIM0 57 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 SPAG8Q99932 426 aaPredicted RBP11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
SFSWAP-210ENST00000541286 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 LYZL1Q6UWQ5 148 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 ZNF492Q9P255 531 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 CRYGBP07316 175 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 PRSS1P07477 247 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 SRSF2Q01130 221 aaKnown RBP11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms