RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 OR9G4Q8NGQ1 327 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 J3KRW8 73 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 SLAQ13239 276 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 FHL3Q13643 280 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 ZFAND2AQ8N6M9 145 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 GNB1LQ9BYB4 327 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
AP003559.1-201ENST00000540906 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 F2Z2F3 143 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 OVOL1O14753 267 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 ARMS2P0C7Q2 107 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 CD33P20138 364 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 HOXA5P20719 270 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 CAMPP49913 170 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 RAB4BP61018 213 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 PSMG4Q5JS54 123 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 RBPMS2Q6ZRY4 209 aaKnown RBP9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 TP53TG3Q9ULZ0 132 aa9.18□□□□□ -0.94
AP003559.1-201ENST00000540906 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 XKRY2A2RUG3 117 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 CRLF1O75462 422 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 PPP1R14DQ9NXH3 145 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 AGRNO00468 2067 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 SORL1Q92673 2214 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 NIPBLQ6KC79 2804 aaeCLIP9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 CCL24O00175 119 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 NUPR1O60356 82 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 TMEM61Q8N0U2 210 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 HIST3H2BBQ8N257 126 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 TPPP3Q9BW30 176 aa9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
AP003559.1-201ENST00000540906 WNK1Q9H4A3 2382 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 FABP5P3A8MUU1 101 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 ORM1P02763 201 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 BMI1P35226 326 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 AKR1D1P51857 326 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 LINC00310P59036 64 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 SSTP61278 116 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 WDR73Q6P4I2 378 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 LINC00477Q96M19 166 aa9.16□□□□□ -0.94
AP003559.1-201ENST00000540906 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 TCF21O43680 179 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 ID1P41134 155 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 ZNF124Q15973 351 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 JMJD8Q96S16 334 aa9.15□□□□□ -0.94
AP003559.1-201ENST00000540906 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 JMJD1CQ15652 2540 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 IGLC6P0CF74 106 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 HBBP68871 147 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 DEFB114Q30KQ6 69 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 NSUN5P1Q3KNT7 163 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 ATP5L2Q7Z4Y8 100 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 PEMTQ9UBM1 199 aa9.15□□□□□ -0.95
AP003559.1-201ENST00000540906 A0A0J9YX75 114 aa9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 M0QZ24 198 aa9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 HLA-DQA1P01909 254 aa9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 APCSP02743 223 aa9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 COA6Q5JTJ3 125 aaKnown RBP9.14□□□□□ -0.95
AP003559.1-201ENST00000540906 MT-ND6P03923 174 aa9.13□□□□□ -0.95
AP003559.1-201ENST00000540906 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
AP003559.1-201ENST00000540906 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
AP003559.1-201ENST00000540906 LENEPQ9Y5L5 61 aa9.13□□□□□ -0.95
AP003559.1-201ENST00000540906 A0A1B0GUT8 65 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 KNCNA6PVL3 124 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 SPRY2O43597 315 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 CRISP2P16562 243 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 SRIP30626 198 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 COX19Q49B96 90 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 APRG1Q8IVJ8 170 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 DYNLRB2Q8TF09 96 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 CTRLP40313 264 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 LURAP1LQ8IV03 231 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
AP003559.1-201ENST00000540906 KLLNB2CW77 178 aa9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 DEFB131AP59861 70 aa9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 RPS20P60866 119 aaKnown RBP9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 SNRPD3P62318 126 aaKnown RBP9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms