RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 C15orf54Q8N8G6 183 aa7.84□□□□□ -1.15
ATL3-204ENST00000540699 Q8TAT8 98 aa7.84□□□□□ -1.15
ATL3-204ENST00000540699 ZC2HC1AQ96GY0 325 aa7.84□□□□□ -1.15
ATL3-204ENST00000540699 C8orf49Q96NF6 230 aa7.84□□□□□ -1.15
ATL3-204ENST00000540699 BIN3Q9NQY0 253 aa7.84□□□□□ -1.15
ATL3-204ENST00000540699 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 TFPI2P48307 235 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 CRIP1P50238 77 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 CMC4P56277 68 aaPredicted RBP7.83□□□□□ -1.16
ATL3-204ENST00000540699 DEFB1P60022 68 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 ERVFC1-1P60608 527 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 ELOBQ15370 118 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 SAPCD1Q5SSQ6 148 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 IBA57Q5T440 356 aaKnown RBP7.83□□□□□ -1.16
ATL3-204ENST00000540699 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 OR8A1Q8NGG7 326 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 FAM19A4Q96LR4 140 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 IMMP2LQ96T52 175 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 B9D2Q9BPU9 175 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 AGRNO00468 2067 aa7.83□□□□□ -1.16
ATL3-204ENST00000540699 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 F6UB75 175 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 ZNF688P0C7X2 276 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 ZNF138P52744 262 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
ATL3-204ENST00000540699 TMEM78Q5T7P6 136 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 PRR27Q6MZM9 219 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 LINC00477Q96M19 166 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 PYGO2Q9BRQ0 406 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 MAP6D1Q9H9H5 199 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
ATL3-204ENST00000540699 TRBV24-1A0A075B6N3 115 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 TRBV7-9A0A0J9YWB2 115 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 GATCO43716 136 aaKnown RBP7.81□□□□□ -1.16
ATL3-204ENST00000540699 CXCL1P09341 107 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 FRMD6-AS1P0C7T7 363 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 ZNF705DP0CH99 300 aaPredicted RBP7.81□□□□□ -1.16
ATL3-204ENST00000540699 ZNF705BP0CI00 300 aaPredicted RBP7.81□□□□□ -1.16
ATL3-204ENST00000540699 CT45A10P0DMU9 189 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 ZNF80P51504 273 aaPredicted RBP7.81□□□□□ -1.16
ATL3-204ENST00000540699 CT83Q5H943 113 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 PSMG4Q5JS54 123 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 GDF5OSQ5U4N7 250 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.81□□□□□ -1.16
ATL3-204ENST00000540699 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 OR10J6PQ8NGY7 276 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 NDFIP1Q9BT67 221 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 URGCP-MRPS24S4R325 110 aa7.81□□□□□ -1.16
ATL3-204ENST00000540699 TGIF2-C20orf24A0A0A6YYL0 155 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 A0A0J9YX75 114 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 A8MTW9 85 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 ZNF705GA8MUZ8 300 aaPredicted RBP7.8□□□□□ -1.16
ATL3-204ENST00000540699 HIST1H1AQ02539 215 aaPredicted RBP7.8□□□□□ -1.16
ATL3-204ENST00000540699 SMUG1Q53HV7 270 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 APRG1Q8IVJ8 170 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 ZFAND2AQ8N6M9 145 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 WWC2-AS2Q96NR7 200 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 SAV1Q9H4B6 383 aaPredicted RBP7.8□□□□□ -1.16
ATL3-204ENST00000540699 RPP21Q9H633 154 aaKnown RBP7.8□□□□□ -1.16
ATL3-204ENST00000540699 SRD5A3Q9H8P0 318 aa7.8□□□□□ -1.16
ATL3-204ENST00000540699 TRAV9-1A0A075B6T8 112 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 SMIM27A0A1W2PRY6 76 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 RBMY1BA6NDE4 496 aaKnown RBP7.79□□□□□ -1.16
ATL3-204ENST00000540699 RBMY1EA6NEQ0 496 aaKnown RBP7.79□□□□□ -1.16
ATL3-204ENST00000540699 SH2D1AO60880 128 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 CA1P00915 261 aaPredicted RBP7.79□□□□□ -1.16
ATL3-204ENST00000540699 P01737 135 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 RBMY1DP0C7P1 496 aaKnown RBP7.79□□□□□ -1.16
ATL3-204ENST00000540699 CRISP2P16562 243 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 S100PP25815 95 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 FAM162BQ5T6X4 162 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 PRR9Q5T870 116 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 KCNIP4Q6PIL6 250 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
ATL3-204ENST00000540699 LYSTQ99698 3801 aa7.78□□□□□ -1.16
ATL3-204ENST00000540699 TYMSP04818 313 aa7.78□□□□□ -1.16
ATL3-204ENST00000540699 RAB5AP20339 215 aa7.78□□□□□ -1.16
ATL3-204ENST00000540699 FAM3BP58499 235 aaPredicted RBP7.78□□□□□ -1.16
ATL3-204ENST00000540699 DEFB131AP59861 70 aa7.78□□□□□ -1.16
ATL3-204ENST00000540699 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
ATL3-204ENST00000540699 DAZAP1Q96EP5 407 aaKnown RBP7.78□□□□□ -1.16
ATL3-204ENST00000540699 A0A1W2PPQ1 181 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 KLLNB2CW77 178 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 NHLRC4P0CG21 123 aaPredicted RBP7.77□□□□□ -1.17
ATL3-204ENST00000540699 HLA-DRB4P13762 266 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
ATL3-204ENST00000540699 ZNF124Q15973 351 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 EBLN2Q6P2I7 272 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 AMTNQ6UX39 209 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 SBSPONQ8IVN8 264 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms