RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TRAV8-1A0A0A6YYK1 113 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 TRAV1-1A0A0B4J248 108 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 C7orf71A4D174 169 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 SMIM9A6NGZ8 99 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 J3KRW8 73 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 IGLV2-11P01706 119 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 NMBP08949 121 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 ATP5G3P48201 142 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 BTN1A1Q13410 526 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 CCDC28AQ8IWP9 274 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 CYB561D1Q8N8Q1 229 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 TMEM75Q8N9X5 138 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 ATG101Q9BSB4 218 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 TMEM208Q9BTX3 173 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 EPDR1Q9UM22 224 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
LPCAT3-209ENST00000540060 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 TRAV12-3A0A0B4J271 114 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 LOC102723971A0A1B0GUV8 181 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 H7BYZ3 331 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 K7EQM0 130 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 PEX7O00628 323 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 PAGE4O60829 102 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF324O75467 553 aaPredicted RBP5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 HBE1P02100 147 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 GPX1P07203 203 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 PPT1P50897 306 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 TAS2R60P59551 318 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 CCL20P78556 96 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 RRN3P1Q2M238 152 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 HIST1H2BAQ96A08 127 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 TVP23CQ96ET8 276 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 LYSTQ99698 3801 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 TCEAL7Q9BRU2 100 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 NIPSNAP3BQ9BS92 247 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 MANBALQ9NQG1 85 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 CELA1Q9UNI1 258 aa5.01□□□□□ -1.61
LPCAT3-209ENST00000540060 PLAC8L1A1L4L8 177 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 TMEM189A5PLL7 270 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 FBLL1A6NHQ2 334 aaKnown RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF705GA8MUZ8 300 aaPredicted RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 F6UZH7 168 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 TEX46H3BTG2 121 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 IFNA7P01567 189 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 PRM2P04554 102 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 AZU1P20160 251 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 FLI1Q01543 452 aaPredicted RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 CST9LP1Q5W188 147 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 Q6AWC8 147 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 Q6ZQT7 251 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 Q86TA4 180 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 RNASE8Q8TDE3 154 aaKnown RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 TMEM263Q8WUH6 116 aaKnown RBP5□□□□□ -1.61
LPCAT3-209ENST00000540060 SGK494Q96LW2 274 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 LINC00479Q96M42 142 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 LINC01587Q99440 93 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 PYGO2Q9BRQ0 406 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 LINC00467Q9BRT7 94 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 GNG13Q9P2W3 67 aa5□□□□□ -1.61
LPCAT3-209ENST00000540060 TRAV34A0A0B4J273 112 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C11orf94C9JXX5 98 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C3orf84H3BNL1 204 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 EIF4EBP3O60516 100 aaPredicted RBP4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 EMP1P54849 157 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 NANOS2P60321 138 aaKnown RBP4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 PMS2P11Q13670 270 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 CASC10Q5T4H9 136 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 PRNTQ86SH4 94 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 LYPD6BQ8NI32 183 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C11orf45Q8TAV5 145 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C16orf74Q96GX8 76 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 FMC1Q96HJ9 113 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 C8orf49Q96NF6 230 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 NDFIP1Q9BT67 221 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 TREM1Q9NP99 234 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 PSG8Q9UQ74 426 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 KLF12Q9Y4X4 402 aa4.99□□□□□ -1.61
LPCAT3-209ENST00000540060 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 TRBV6-1A0A0K0K1D8 114 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 TEX48A0A1B0GUV7 120 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 LTAP01374 205 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 IFNA1P01562 189 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 BCL2P10415 239 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 HTN1P15515 57 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 AKR1C3P42330 323 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF80P51504 273 aaPredicted RBP4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 UBE2G1P62253 170 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 BLOC1S1P78537 153 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 MEF2BQ02080 365 aaPredicted RBP4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 TMEM183BQ1AE95 376 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 ANXA2RQ3ZCQ2 193 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 ZFAND6Q6FIF0 208 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms