RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MRPL20Q9BYC9 149 aaKnown RBP6□□□□□ -1.45
CCDC60-204ENST00000539847 SLC25A39Q9BZJ4 359 aaPredicted RBP6□□□□□ -1.45
CCDC60-204ENST00000539847 IGHV3OR15-7A0A075B7D8 119 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 H3BUT2 72 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 CRYGBP07316 175 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 ORM2P19652 201 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 EVI2AP22794 236 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 GCSHP23434 173 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 COL8A2P25067 703 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 SCGB2A2Q13296 93 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 CD300EQ496F6 205 aaPredicted RBP5.99□□□□□ -1.45
CCDC60-204ENST00000539847 LCNL1Q6ZST4 164 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 LHFPL4Q7Z7J7 247 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 ORMDL3Q8N138 153 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 VGLL1Q99990 258 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 RPH3ALQ9UNE2 315 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 SPCS1Q9Y6A9 102 aa5.99□□□□□ -1.45
CCDC60-204ENST00000539847 SVEP1Q4LDE5 3571 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 TRBV19A0A075B6N1 114 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 A0A096LNJ9 63 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 A0A1W2PPI3 338 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 A0A1W2PRX2 142 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 E7EUB6 86 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 TNFRSF13BO14836 293 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 SAP30O75446 220 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 IGHV3-7P01780 117 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 TNFRSF1AP19438 455 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 PPIFP30405 207 aaKnown RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 SSBP2P81877 361 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 TNFAIP6P98066 277 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 PLGLAQ15195 96 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 MRGPRG-AS1Q2M3A8 158 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 UTF1Q5T230 341 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 SRSF12Q8WXF0 261 aaKnown RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 LEAP2Q969E1 77 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 IFI27L1Q96BM0 104 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 ZNF414Q96IQ9 312 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 PRELID3AQ96N28 172 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 SHANK2-AS3Q9BTD1 123 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 FZR1Q9UM11 496 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 PSG8Q9UQ74 426 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 F11RQ9Y624 299 aaKnown RBP5.98□□□□□ -1.45
CCDC60-204ENST00000539847 ARFGEF3Q5TH69 2177 aa5.98□□□□□ -1.45
CCDC60-204ENST00000539847 E9PLD3 99 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 ATP5LO75964 103 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 NCR2O95944 276 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 ARMS2P0C7Q2 107 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 S100A7P31151 101 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 BMI1P35226 326 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 RPL27AP46776 148 aaKnown RBP5.97□□□□□ -1.45
CCDC60-204ENST00000539847 ZNF138P52744 262 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 HOXA4Q00056 320 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-204ENST00000539847 PRNTQ86SH4 94 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 NUP37Q8NFH4 326 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 ZNF48Q96MX3 618 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-204ENST00000539847 CCL13Q99616 98 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 CNFNQ9BYD5 112 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 NXT2Q9NPJ8 142 aaKnown RBP5.97□□□□□ -1.45
CCDC60-204ENST00000539847 MRPL36Q9P0J6 103 aaKnown RBP5.97□□□□□ -1.45
CCDC60-204ENST00000539847 INSIG2Q9Y5U4 225 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 MEGF8Q7Z7M0 2845 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 TENM1Q9UKZ4 2725 aa5.97□□□□□ -1.45
CCDC60-204ENST00000539847 IGHV4-61A0A0C4DH41 118 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 A0A1B0GV72 72 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 H3BRN7 92 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 SPRY3O43610 288 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 TGFAP01135 160 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 IGHV1-46P01743 117 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 FCER1GP30273 86 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 IFI27P40305 119 aaPredicted RBP5.96□□□□□ -1.46
CCDC60-204ENST00000539847 SIGLEC15Q6ZMC9 328 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 GOLT1AQ6ZVE7 132 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 TEX29Q8N6K0 151 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 PHLDA1Q8WV24 401 aaPredicted RBP5.96□□□□□ -1.46
CCDC60-204ENST00000539847 ZC2HC1AQ96GY0 325 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 VCX2Q9H322 139 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 THYN1Q9P016 225 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 KAAG1Q9UBP8 84 aa5.96□□□□□ -1.46
CCDC60-204ENST00000539847 HEATR1Q9H583 2144 aaKnown RBP5.95□□□□□ -1.46
CCDC60-204ENST00000539847 I3L2K1 104 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 M0R1B8 84 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 MRPS12O15235 138 aaKnown RBP5.95□□□□□ -1.46
CCDC60-204ENST00000539847 CSN3P07498 182 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 CRIP1P50238 77 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 DLX6P56179 175 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 MRPL51Q4U2R6 128 aaKnown RBP5.95□□□□□ -1.46
CCDC60-204ENST00000539847 CCDC144NLQ6NUI1 221 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 C11orf44Q8N8P7 122 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 LINC01356Q8N9X3 169 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 ZNF502Q8TBZ5 544 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 ARPC1AQ92747 370 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 RAB1BQ9H0U4 201 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 HHLA3Q9XRX5 114 aa5.95□□□□□ -1.46
CCDC60-204ENST00000539847 TET2Q6N021 2002 aaPredicted RBP5.94□□□□□ -1.46
CCDC60-204ENST00000539847 A0A1B0GWB2 263 aa5.94□□□□□ -1.46
CCDC60-204ENST00000539847 WI2-2373I1.2A0A1W2PRP0 233 aa5.94□□□□□ -1.46
CCDC60-204ENST00000539847 GAGE12HA6NDE8 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms